GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 02:31:41, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Entomospira nematocera strain BR208 chromosome.
CP118168.1:547707-547727
TTATGACGGGTTACGTCAATCTTTTGATTG547707GATATGTTGAAGAGTTGGCTGTTGGTCTAAAGGATACAGCTACAAAGGTTT
Parastrongyloides trichosuri strain KNP genome assembly, scaffold: PTRK_scaffold0000007.
LM523164.1:685080-685100
TTATTGGATTTTCAAAATCTATCTTTGAAG685080GATATGTTGAAGAGTTGGCTGTTGAAATTGATGAAGCTATTAAGAATGGTG
Lucinisca nassula genome assembly, chromosome: 14.
OY757023.1:106567798-106567818
GCAGTCTTGTCAGAGCCTTTGCTGCTCTCG106567798GATATGTTGAAGAGTTGGCTGCGCACATGCATTTGACAAAATGTATGTAAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CAGCCAACTCTTCAACATATC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CAGCCAACTCTTCAACATATC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.180 | 0.171 | search_plus_done; http://172.18.8.135:50400/match?q=CAGCCAACTCTTCAACATATC&k=0&no_gap=0&offset=0&limit=50
0.286 | 0.106 | search_minus_done; http://172.18.8.135:50400/match?q=GATATGTTGAAGAGTTGGCTG&k=0&no_gap=0&offset=0&limit=50
0.288 | 0.002 | cgi_end;

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