GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 19:30:53, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

TSA: Physalis peruviana Php00a02281.10106 mRNA sequence.
JO134198.1:1503-1522
GGAGATACAGATCTTGAAAGCAATTTTTCA1503CAGCCATCTTCTCCTGGTAGTGAAGACTTTGATAATGCTTCTATCGACAG
TSA: Physalis peruviana Php00a02281.10107 mRNA sequence.
JO134199.1:626-645
GGAGATACAGATCTTGAAAGCAATTTTTCA626CAGCCATCTTCTCCTGGTAGTGAAGACTTTGATAATGCTTCTATCGACAG
Balaenoptera acutorostrata genome assembly, chromosome: 19.
OX465369.1:64493020-64493039
AGTGGCCCAGAGTGAAGCCTTTGATAAAAT64493020CTACCAGGAGAAGATGGCTGGGCTCGCTCAAGACCTATTCCCATGGGAAT
Barbatula barbatula genome assembly, chromosome: 3.
OX344770.1:1204092-1204111
TCGCAAGAAAGTGGAACGCATCGTGGAGGA1204092CTACCAGGAGAAGATGGCTGACCTTAACAAATGCATGAAGTTCATCAAGC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CAGCCATCTTCTCCTGGTAG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CAGCCATCTTCTCCTGGTAG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.227 | 0.219 | search_plus_done; http://172.18.8.135:50400/match?q=CAGCCATCTTCTCCTGGTAG&k=0&no_gap=0&offset=0&limit=50
0.358 | 0.130 | search_minus_done; http://172.18.8.135:50400/match?q=CTACCAGGAGAAGATGGCTG&k=0&no_gap=0&offset=0&limit=48
0.359 | 0.002 | cgi_end;

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