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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 11:41:55, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sarcophilus harrisii genome assembly, chromosome: 6.
LR735559.1:219824325-219824341
CCCCAGATGTTGGTGTCTGAGGAAGAGCCC219824325CAGCCGCCTCTTGTTAGTTCAATTGGAAGGGTTGGCACATTAAAGAG
Lutra lutra genome assembly, chromosome: 14.
LR738416.1:88739176-88739192
CCGGCAGCGGCTGCCCCCCAGTCCAGGAGA88739176CAGCCGCCTCTTGTTAGCTCAAAGAATGAAGGTTCCCTCAGGTCAGT
Theobroma cacao microsatellite DNA, clone mTcCIR15.
Y16988.1:1-17
1CAGCCGCCTCTTGTTAGACCAATCTCTCTCTCTCTCTCTCTCTCTCT
Theobroma grandiflorum isolate C1074 chromosome 1.
CP142130.1:43089471-43089487
TGGGGAAGGTATCATCTCGTGCGGGTAGAC43089471CAGCCGCCTCTTGTTAGACCAATCTCTCTCTCTCTCTCTCTTTCTCA
Theobroma cacao genome assembly, chromosome: 1.
OY284458.1:35510577-35510593
CGGAGAAGGTATTATCTCGTGCGGGTAGAC35510577CAGCCGCCTCTTGTTAGACCAATCTCTCTCTCTCTCTCTCTCTCTCT
Cheilosia pagana genome assembly, chromosome: 2.
OW386167.1:3094138-3094154
AATTTGCATCTGCATATGCGGACAATTTCA3094138CAGCCGCCTCTTGTTAGCTGCGGACTTTTTGCCAAAAGGAGTTGCCA
Heligmosomoides polygyrus polygyrus genome assembly, chromosome: III.
OX377203.1:74215398-74215414
TTTGAACTACCCCAGCAAAGGCGAGATTCA74215398CAGCCGCCTCTTGTTAGAACAATGTGCTCGCATTCACTGCTCGTGAG
Elophila nymphaeata genome assembly, chromosome: 22.
OY039088.1:10162479-10162495
TTAAAGCTTTGCAAATTAGGACGGATTAAA10162479CAGCCGCCTCTTGTTAGCGAAAGCGGAGATTTTTAAGTGGTCGACCT
Gastrophysa polygoni genome assembly, chromosome: 1.
OY755082.1:1113943-1113959
ACTTCGGACGACTCGTTTCGCGGCAGTTAG1113943CAGCCGCCTCTTGTTAGGGGGTGGTGGATATCCATCGGCATCCTCAA
Chorisops tibialis genome assembly, chromosome: 2.
OY770263.1:161702633-161702649
CTTTTCCTCTTCTATTATTTCTTTTGACAA161702633CAGCCGCCTCTTGTTAGATCGGGGCTCTTCTTAGGTAGATCCTTAGC
Martes martes genome assembly, chromosome: 14.
OY734077.1:314344-314360
ACTGCCCTGAGGGAAGCTTCATTCTTTGAG314344CTAACAAGAGGCGGCTGTCTCCTGGGCTGGGGGGCAGCCGCTGCCGG
Parambassis ranga genome assembly, chromosome: 13.
LR131963.1:19076401-19076417
AAGGTGCATAATGTAAAATGAAATGGACTA19076401CTAACAAGAGGCGGCTGAGTCCAGGTAAAAACCAAAGTCCAACTGTT
Haliaeetus albicilla genome assembly, chromosome: 11.
OX381648.1:19113498-19113514
AGCACGGAGGAGGGCCACTGCTCCGCCTTG19113498CTAACAAGAGGCGGCTGGTCCAAGCATTGCTTTACAGGCCCTGGGTC
Podarcis cretensis genome assembly, chromosome: 1.
OX638149.1:4306488-4306504
CAGCATGAAGGATGTCCCACAGGGCCGGCC4306488CTAACAAGAGGCGGCTGCCTCAGGCGGCAAATATTGAAGGGCGTCAA
Chelon labrosus genome assembly, chromosome: 14.
OY741302.1:15241447-15241463
CAAACTCCCAATTACTCCTCCTTTTTCCTC15241447CTAACAAGAGGCGGCTGAGGCCCTTAACAAGCCTTTAAATAGACTCC
bacterium isolate 04c6e7c0-51ca-4241-8bf9-7f12ca1f9b1d genome assembly, chromosome: 132.
OY760359.1:68871-68887
GAATAGACGCTCGTACGTTGATTTGTTCTC68871CTAACAAGAGGCGGCTGAAAAAACCATCTTGGGTGAATTCGGCTTCG
Theobroma cacao microsatellite DNA, locus mTcCIR15, clone Col_213.
AJ748491.1:228-244
AGAGAGAGAGAGAGAGAGAGAGAGATTGGT228CTAACAAGAGGCGGCTG
Theobroma cacao microsatellite DNA, locus mTcCIR15, clone COL_214.
AJ748492.1:234-250
AGAGAGAGAGAGAGAGAGAGAGAGATTGGT234CTAACAAGAGGCGGCTG
Theobroma cacao microsatellite DNA, locus mTcCIR15, clone COL_218.
AJ748493.1:236-252
AGAGAGAGAGAGAGAGAGAGAGAGATTGGT236CTAACAAGAGGCGGCTG
Theobroma cacao isolate Sca6 chromosome 1.
CP139290.1:3671826-3671842
ATATATAGAGAGAGAGAGAGAGAGATTGGT3671826CTAACAAGAGGCGGCTGGTCTACCCGCACGAGATAATACCTTCTCCG
Theobroma cacao genome assembly, chromosome: I.
LT594788.1:3691007-3691023
ATATAGAGAGAGAGAGAGAGAGAGATTGGT3691007CTAACAAGAGGCGGCTGGTCTACCCGCACGAGATAATACCTTCTCCG
Theobroma cacao genome assembly, chromosome: 1.
OY284438.1:3732468-3732484
ATAGAGAGAGAGAGAGAGAGAGAGATTGGT3732468CTAACAAGAGGCGGCTGGTCTACCCGCACGAGATAATACCTTCTCCG
Theobroma cacao genome assembly, chromosome: 1.
OY284448.1:3732740-3732756
ATATATAGAGAGAGAGAGAGAGAGATTGGT3732740CTAACAAGAGGCGGCTGGTCTACCCGCACGAGATAATACCTTCTCCG
Aelia acuminata genome assembly, chromosome: 2.
OU426979.1:57712934-57712950
CTCATCCGACCGATTGAAATATGGGAATTG57712934CTAACAAGAGGCGGCTGAAAGTGCTAGAACGTGTCCCATTTTTTTCT
Shargacucullia verbasci genome assembly, chromosome: 24.
OX387304.1:2162299-2162315
TTGTTCTCAACAACATTAGGAACACCCAGT2162299CTAACAAGAGGCGGCTGAGTATCAGTATTTTACACGGAGCGACTGCC
Sympetrum striolatum genome assembly, chromosome: 6.
OX388346.1:77356589-77356605
TTGCAATGCACATACTCTACAAACTAATAT77356589CTAACAAGAGGCGGCTGTTGACATAATCTTCCTTTTGTCACTGTAAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CAGCCGCCTCTTGTTAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CAGCCGCCTCTTGTTAG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.161 | 0.152 | search_plus_done; http://172.18.8.135:50400/match?q=CAGCCGCCTCTTGTTAG&k=0&no_gap=0&offset=0&limit=50
0.309 | 0.148 | search_minus_done; http://172.18.8.135:50400/match?q=CTAACAAGAGGCGGCTG&k=0&no_gap=0&offset=0&limit=40
0.320 | 0.011 | cgi_end;

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