GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 08:47:20, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Canis lupus familiaris breed Labrador retriever chromosome 01a.
CP050602.1:68761332-68761351
TTCTGCAGTCCGGTCACCATTCAGGCCTTG68761332CAGCTAGTGTGAAGGGAAACCAACCCTGGCCTCTGGGTGGACATGTGTTG
Canis lupus familiaris breed Labrador retriever chromosome 01b.
CP050628.1:69503627-69503646
TTCTGCAGTCCGGTCACCATTCAGGCCTTG69503627CAGCTAGTGTGAAGGGAAACCAACCCTGGCCTCTGGGTGGACATGTGTTG
Telmatherina bonti genome assembly, chromosome: 7.
OW121827.1:12440071-12440090
ATTTTATAAGCCTGTCAGATGGAGACTTGT12440071CAGCTAGTGTGAAGGGAAACATCACGCGTCTCATTGTGATGTCATGGAAC
Endomychus coccineus genome assembly, chromosome: 1.
OY294067.1:79693482-79693501
CTGGCTGAATAAGTGAGAAGGGATAAACTC79693482CAGCTAGTGTGAAGGGAAACGAACTGGCCAAACGGGGTTCCGATTCAACG
Endomychus coccineus genome assembly, chromosome: 2.
OY294068.1:86921513-86921532
CTGGTTGAACTAGCCAGAAGGAACAAACTC86921513CAGCTAGTGTGAAGGGAAACGAAGTGGCCGATGAATTGGCCAAACGGGGC
Mus musculus molossinus genome assembly, chromosome: 5.
OW971662.1:29968636-29968655
TGTAGCCATTAATCTCAGGGGCAAGGGTCT29968636GTTTCCCTTCACACTAGCTGCTCTCCTGGGAATACTGCTCTCCCTGTTTT
Mus musculus musculus genome assembly, chromosome: 5.
OW971768.1:22739755-22739774
TGTAGCCATTAATCTCAGGGGCAAGGGTCT22739755GTTTCCCTTCACACTAGCTGCTCTCCTGGGAATACTGCTCTCCCTGTTTT
Canis lupus genome assembly, chromosome: 1.
HG994383.1:56949117-56949136
CAACACATGTCCACCCAGAGGCCAGGGTTG56949117GTTTCCCTTCACACTAGCTGCAAGGCCTGAATGGTGACCGGACTGCAGAA
Endomychus coccineus genome assembly, chromosome: 1.
OY294067.1:281985783-281985802
ACCCCGTTTGGCCAATTCATCGGCTACTTC281985783GTTTCCCTTCACACTAGCTGGAGTATGTTCCTTCTGGCATATTCAACCAG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CAGCTAGTGTGAAGGGAAAC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CAGCTAGTGTGAAGGGAAAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.103 | 0.095 | search_plus_done; http://172.18.8.135:50400/match?q=CAGCTAGTGTGAAGGGAAAC&k=0&no_gap=0&offset=0&limit=50
0.124 | 0.020 | search_minus_done; http://172.18.8.135:50400/match?q=GTTTCCCTTCACACTAGCTG&k=0&no_gap=0&offset=0&limit=45
0.126 | 0.003 | cgi_end;

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