GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 02:15:10, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

TSA: Pyrus communis mRNA, contig: lc48717.
FX655003.1:1-23
1CAGCTCTTGGACCAATCTTGAGTTTTGTAATGCTGTGTGGTTAAATTATTGAG
TSA: Pyrus x bretschneideri Unigene22775_XinShao mRNA sequence.
JR616777.1:44-66
AGAGAGGGTTTAGGGTCATGTATTTTGTAA44CAGCTCTTGGACCAATCTTGAGTTTTGTAATGCTGTGTGGTTAAATTATTGAG
Pyrus pyrifolia cultivar Housui mRNA, clone: TsuENH045_10886m, 5' end sequence.
AB450721.1:43-65
CTCAATAATTTAACCACACAGCATTACAAA43ACTCAAGATTGGTCCAAGAGCTGTTACAAAATACATGACCCTAACCCTCTCTC
Pyrus communis genome assembly, chromosome: 10.
OY757077.1:14800199-14800221
CTCAATAATTTAACCACACAGCATTACAAA14800199ACTCAAGATTGGTCCAAGAGCTGTTACAAAATACATGACCCTAACCCTCTCTC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CAGCTCTTGGACCAATCTTGAGT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CAGCTCTTGGACCAATCTTGAGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.101 | 0.093 | search_plus_done; http://172.18.8.135:50400/match?q=CAGCTCTTGGACCAATCTTGAGT&k=0&no_gap=0&offset=0&limit=50
0.116 | 0.015 | search_minus_done; http://172.18.8.135:50400/match?q=ACTCAAGATTGGTCCAAGAGCTG&k=0&no_gap=0&offset=0&limit=48
0.118 | 0.002 | cgi_end;

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