GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 19:49:25, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Danio kyathit genome assembly, chromosome: 25.
LR812543.1:26481888-26481907
GAGCTTTTTCAAATTATATCTTGGCATTTG26481888CAGCTTTTGCAGGTCCATTTGTTGTGTTCCCTTTTTCCTCAATTTAGTTT
Trifolium pratense cDNA clone:RCE32232.
BB923988.1:176-195
TTTCTACATACAAATTAATCACTGTACTTT176CAGCTTTTGCAGGTCCATTTTTGTTTTTTTCCTCTGTTCTTCACAGGGTT
Trifolium pratense RNA for hypothetical protein, complete cds, clone: C27.
AB236839.1:200-219
TTTCTACATACAAATTAATCACTGTACTTT200CAGCTTTTGCAGGTCCATTTTTGTTTTTTTCCTCTGTTCTTCACAGGGTT
Magelona johnstoni genome assembly, chromosome: 13.
OZ012696.1:3431440-3431459
ATGGATTCACCATTTTGATTTTGCTATCAT3431440CAGCTTTTGCAGGTCCATTTACCTCAGTCAACTGCTGGAAACTAAGAGTA
Magelona johnstoni genome assembly, chromosome: 13.
OZ012696.1:3440340-3440359
ATGGATTCACCATTTTGATTTTGCTATCAT3440340CAGCTTTTGCAGGTCCATTTACCTCAGTCAACTGCTGGAAACTAAGAGTA
Danio aesculapii genome assembly, chromosome: 25.
LR812502.1:15069955-15069974
AAACTAAATTGAGGAAAAAGGGAACACAAC15069955AAATGGACCTGCAAAAGCTGCAAATGCCAAGATATAATTTGAAAAAGCTC
Magelona johnstoni genome assembly, chromosome: 8.
OZ012691.1:3250232-3250251
TACTCTCAATTTCCAGCTTTTGACTGAGGT3250232AAATGGACCTGCAAAAGCTGATGATAGCAAAATCATGTGCCCTTTTAACC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CAGCTTTTGCAGGTCCATTT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CAGCTTTTGCAGGTCCATTT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.117 | 0.109 | search_plus_done; http://172.18.8.135:50400/match?q=CAGCTTTTGCAGGTCCATTT&k=0&no_gap=0&offset=0&limit=50
0.140 | 0.023 | search_minus_done; http://172.18.8.135:50400/match?q=AAATGGACCTGCAAAAGCTG&k=0&no_gap=0&offset=0&limit=45
0.141 | 0.001 | cgi_end;

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