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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-12 07:39:46, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Arachis hypogaea DNA, clone: AHGS40P15.
DH961609.1:15-34
ACCTTCAAGGCAAC15CAGGACGGCAAACACTAACACTGTTAATATTTTCTGCAAGTAAATGTGAG
Arachis hypogaea cultivar Shitouqi chromosome B08.
CP031000.1:12292019-12292038
GATTTCAGTAGCAGGTACCTTCAAGGCAAC12292019CAGGACGGCAAACACTAACACTGTTAATATTTTCTGCAAGTAAATGTGAG
Arachis ipaensis cultivar K30076 chromosome 08.
CP049899.1:11899072-11899091
GATTTCAGTAGCAGGTACCTTCAAGGCAAC11899072CAGGACGGCAAACACTAACACTGTTAATATTTTCTGCAAGTAAATGTGAG
Pecten maximus genome assembly, chromosome: 15.
LR736852.1:7077010-7077029
CATACCTTTCTGATTTGGGAGGGTGTACTT7077010TGTTAGTGTTTGCCGTCCTGTGATAGCGGTGAAGTGATACCAAATTTATA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CAGGACGGCAAACACTAACA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CAGGACGGCAAACACTAACA | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.271 | 0.262 | search_plus_done; http://172.18.8.135:50400/match?q=CAGGACGGCAAACACTAACA&k=0&no_gap=0&offset=0&limit=50
0.364 | 0.093 | search_minus_done; http://172.18.8.135:50400/match?q=TGTTAGTGTTTGCCGTCCTG&k=0&no_gap=0&offset=0&limit=47
0.365 | 0.001 | cgi_end;

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