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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-13 02:32:54, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Rangifer tarandus platyrhyncus genome assembly, chromosome: 26.
OX459962.2:54250085-54250102
CAGGGACCTCGGCAACTCCTCAAAACCCCC54250085CAGGACCAGCGACAGGACACGTGGGATTCAGGCAGTCCTTGCTCATCA
Plecotus auritus genome assembly, chromosome: 9.
OY734030.1:30694208-30694225
CAGAGACAGGGCCAGCGACAGGGCCAGGAA30694208CAGGACCAGCGACAGGACCAGAGACAGGCTGAGATTTGCCTGGGATCA
Muntiacus reevesi genome assembly, chromosome: 5.
OZ005629.1:45645578-45645595
CAGGGACCTTGGCGACTCCTCAAAACCCCC45645578CAGGACCAGCGACAGGACACGTGGGATTCAGGGAGTCCTTGCTCATCA
Planiliza haematocheilus suppressor of cytokine signaling (SOCS2) mRNA, complete cds.
MK361109.1:636-653
CCACCTGGTGGAGCACTACGTCCAGCTGTC636CAGGACCAGCGACAGGACGGCGCCTGCGTCCAACTCTCAGGCCTCCAC
Gobius niger genome assembly, chromosome: 1.
OX637595.1:48404937-48404954
CAAGAGATCATCGACCCTCAGCAGCTCCAA48404937CAGGACCAGCGACAGGACCCTGTTCTCTCTCTAGTCCACTCCTGGATG
Gobius niger genome assembly, chromosome: 3.
OX637597.1:20600815-20600832
CAAGAGATCATCGACCCTCAGCAGCTCCAA20600815CAGGACCAGCGACAGGACCCTGTTCTCTCCCTAGTCCACTCCTGGATG
Gobius niger genome assembly, chromosome: 7.
OX637601.1:1633067-1633084
CAAGAGATCATCGACCCTCAGCAGCTCCAA1633067CAGGACCAGCGACAGGACCCTGTTCTCTCCCTAGTCCACTCCTGGATG
Gobius niger genome assembly, chromosome: 8.
OX637602.1:1492341-1492358
CAAGAGATCATCGACCCTCAGCAGCTCCAA1492341CAGGACCAGCGACAGGACCCTGTTCTCTCCCTAGTCCACTCCTGGATG
Gobius niger genome assembly, chromosome: 17.
OX637611.1:13851469-13851486
CAAGAGATCATCGACCCTCAGCAGCTCCAA13851469CAGGACCAGCGACAGGACCCTGTTCTCTCCCTAGTCCACTCCTGGATG
Fringilla coelebs genome assembly, chromosome: 1.
OY740724.1:62783823-62783840
AGGAGCACTAGGCACTGATCTCTTCTGTGA62783823CAGGACCAGCGACAGGACTTGAGGGAATGGCCTGATGTTTTATCTGAT
Chelon labrosus genome assembly, chromosome: 23.
OY741311.1:21182161-21182178
CCACCTGGTGGAGCACTACGTCCAGCTGTC21182161CAGGACCAGCGACAGGACGGCGCCGGCGTCGGACGCTCAGGCCTCCAC
Sequence 2 from patent US 9556238.
KH522593.1:179514-179531
GCTGTTGGGGGCGGCGACGCAGACCGCCAT179514CAGGACCAGCGACAGGACCAGCCCGTCCCACGCCACCTTGACCGCGCC
MAG: Phycisphaerales bacterium isolate bin164 chromosome.
CP070782.1:6319671-6319688
TACGAATAGCCCTTTGAGCCAACTGCGCAG6319671CAGGACCAGCGACAGGACCGACGAACAGATGAAGATCCCCAACTGGGT
Ochrobactrum anthropi genome assembly, chromosome: II.
LT671862.1:1607218-1607235
GCGCGATGCCGTCGAGATCGTGTAGCCGAG1607218CAGGACCAGCGACAGGACGAAGATCAGCACGCAGGTCAGGAGAAGTGC
MMSP0064_F11 MMSP Macaca mulatta cDNA, mRNA sequence.
CB551125.1:244-261
GACAACTGCCACTACTCCTTCAAAAGGAGC244CAGGACCAGCGACAGGACTCATAAGAGGACTGGCTAAAGTGAAGTGTG
TSA: Macaca mulatta Mamu_533143 mRNA sequence.
JU346781.1:250-267
GACAACTGCCACTACTCCTTCAAAAGGAGC250CAGGACCAGCGACAGGACTCATAAGAGGACTGGCTAAAGTGAAGTGTG
TSA: Macaca mulatta Mamu_383794 mRNA sequence.
JU491014.1:298-315
GACAACTGCCACTACTCCTTCAAAAGGAGC298CAGGACCAGCGACAGGACTCATAAGAGGACTGGCTAAAGTGAAGTGTG
TSA: Macaca mulatta Mamu_383795 mRNA sequence.
JU491015.1:298-315
GACAACTGCCACTACTCCTTCAAAAGGAGC298CAGGACCAGCGACAGGACTCATAAGAGGACTGGCTAAAGTGAAGTGTG
TSA: Macaca mulatta Mamu_383796 mRNA sequence.
JU491016.1:298-315
GACAACTGCCACTACTCCTTCAAAAGGAGC298CAGGACCAGCGACAGGACTCATAAGAGGACTGGCTAAAGTGAAGTGTG
TSA: Macaca mulatta Mamu_574512 mRNA sequence.
JV720526.1:61-78
GACAACTGCCACTACTCCTTCAAAAGGAGC61CAGGACCAGCGACAGGACTCATAAGAGGACTGGCTAAAGTGAAGTGTG
Verticillium nonalfalfae strain WCS 072 chromosome 5.
CP069141.1:2712040-2712057
CATCGGCAAGACCATCGACAAGACCAGCGA2712040CAGGACCAGCGACAGGACCAGCGACAGGACCAGCGACAAGACGGCCAA
Verticillium nonalfalfae strain WCS 072 chromosome 5.
CP069141.1:2712052-2712069
CATCGACAAGACCAGCGACAGGACCAGCGA2712052CAGGACCAGCGACAGGACCAGCGACAAGACGGCCAAGGCCCTACCACC
Verticillium nonalfalfae strain CBS 382.66 chromosome 5.
CP069150.1:2725623-2725640
CATCGGCAAGACCATCGACAAGACCAGCGA2725623CAGGACCAGCGACAGGACCAGCGACAGGACCAGCGACAAGACGGCCAA
Verticillium nonalfalfae strain CBS 382.66 chromosome 5.
CP069150.1:2725635-2725652
CATCGACAAGACCAGCGACAGGACCAGCGA2725635CAGGACCAGCGACAGGACCAGCGACAAGACGGCCAAGGCCCTACCACC
Platismatia glauca genome assembly, chromosome: 9.
OY745771.1:1343815-1343832
AGCTCTGCCCTACCTGCTGTCCAGTCGTTC1343815CAGGACCAGCGACAGGACCCGACCATGTCCTAACTCTTACCAAGCTGT
Magnetospirillum magneticum AMB-1 DNA, complete genome.
AP007255.1:179514-179531
GCTGTTGGGGGCGGCGACGCAGACCGCCAT179514CAGGACCAGCGACAGGACCAGCCCGTCCCACGCCACCTTGACCGCGCC
Mesorhizobium sp. 113-1-2 DNA, complete genome.
AP023242.1:7497401-7497418
GGCAACGTAAACAATCACAGCGTTGGCGCA7497401CAGGACCAGCGACAGGACGCGACAAAAGATTCTACAAGGCAATGCCGT
Burkholderia cepacia ATCC 25416 chromosome 3, complete sequence.
CP007747.1:1088573-1088590
CAGGTTGCGCGTGTCGGGCGGCAACTCGGC1088573CAGGACCAGCGACAGGACGGTGAACAGCACGGCGGTGTCGCCGGCCTG
Ochrobactrum anthropi strain OAB chromosome 2, complete sequence.
CP008819.1:1022966-1022983
GCGCGATGCTGTCGAGATCGTGTAGCCGAG1022966CAGGACCAGCGACAGGACGAAGATCAGTACGCAGGTCAGGAGAAGTGC
Bordetella flabilis strain AU10664 chromosome, complete genome.
CP016172.1:2862991-2863008
GCTGTGGGCTGTATTCGGCGCGTCGGCGAC2862991CAGGACCAGCGACAGGACCGATACGCCGGCGACGAAGACGAACGCCGA
Streptomyces lydicus strain GS93 isolate 23 chromosome, complete genome.
CP019457.1:8185164-8185181
GCCGCCCGAGGCGGTGAGCTGCAGGATGAG8185164CAGGACCAGCGACAGGACGTCGCCGGGAACCCCGAACACGGTGCGCAG
Streptomyces sp. MOE7 chromosome, complete genome.
CP019779.1:8333343-8333360
GCCGCCCGAGGCGGTGAGCTGCAGGATGAG8333343CAGGACCAGCGACAGGACGTCGCCGGGAACCCCGAACACGGTGCGCAG
Burkholderia cepacia strain FDAARGOS_345 chromosome 3, complete sequence.
CP022082.2:385513-385530
CAGGTTGCGCGTGTCGGGCGGCAACTCGGC385513CAGGACCAGCGACAGGACGGTGAACAGCACGGCGGTGTCGCCGGCCTG
Massilia sp. YMA4 chromosome, complete genome.
CP030092.1:1669686-1669703
CAGGTAGAGAAACGTGAAGCCGGCCGTGGT1669686CAGGACCAGCGACAGGACCGTGTAGAACAGCGCCCCGGCCACGTCGCC
Burkholderia cepacia strain 39628 chromosome 3, complete sequence.
CP032010.1:1079841-1079858
CAGGTTGCGCGTGTCGGGCGGCAACTCGGC1079841CAGGACCAGCGACAGGACGGTGAACAGCACGGCGGTATCGCCGGCCTG
Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence.
CP032348.1:464292-464309
GATCCGCGTGGGACCGTCCGCTTACGTCAG464292CAGGACCAGCGACAGGACCGGGAAAGCGTTGATGACGACCAGCGCGAC
Caulifigura coniformis strain Pan44 chromosome.
CP036271.1:3755482-3755499
CATTACGAAACGCTCGACAGACGACCAGAG3755482CAGGACCAGCGACAGGACGGCGAAGGGAAGCGCCCACAGCCCCAGCGA
Mycolicibacterium frederiksbergense strain LB 501T chromosome.
CP038799.1:2865893-2865910
GCCGATCACCAGGACCACTGCGAACAGCAG2865893CAGGACCAGCGACAGGACGGCCGCCCGTGCGGGATTGAACCCTGAGCG
Ochrobactrum sp. EEELCW01 chromosome 2, complete sequence.
CP047599.1:1594500-1594517
GCGCGATGCCGTCGAGATCGTGTAGCCGAG1594500CAGGACCAGCGACAGGACGAAGATCAGCACGCAGGTCAGGAGAAGTGC
Ochrobactrum sp. WY7 chromosome 2, complete sequence.
CP049797.1:1438346-1438363
GCGCGATGCTGTCGAGATCGTGTAGCCGAG1438346CAGGACCAGCGACAGGACGAAGATCAGTACGCAGGTCAGGAGAAGTGC
Ruania alkalisoli strain RN3S43 chromosome, complete genome.
CP063169.1:2470380-2470397
GTAGTTCAGGCTCAGCGCCACCACGGTACC2470380CAGGACCAGCGACAGGACAGTCGCACTGGCGACACTGCGCCTACTCGG
Gloeobacter morelensis MG652769, complete genome.
CP063845.1:3325098-3325115
GTCCGCCACTTCATCCTGGGCACGCTGCTC3325098CAGGACCAGCGACAGGACCGTAGCACTTGCCACCAGACCGCCTGCGAA
Brucella anthropi strain PBO chromosome 1, complete sequence.
CP064062.1:1638016-1638033
GCGCGATGCCGTCGAGATCGTGTAGCCGAG1638016CAGGACCAGCGACAGGACGAAGATCAGCACGCAGGTCAGGAGAAGTGC
Nonomuraea gerenzanensis strain L70 chromosome, complete genome.
CP084058.1:4375937-4375954
CGGCACCATCATGCCGCTGAAGAACGTGCT4375937CAGGACCAGCGACAGGACCGTGACGCCGCGGTCGTCGAGCAGCCAGCA
Brucella anthropi strain T210003 chromosome 2, complete sequence.
CP088965.1:1703442-1703459
GCGCGATGCTGTCGAGATCGTGTAGCCGAG1703442CAGGACCAGCGACAGGACGAAGATCAGCACGCAGGTCAGGAGAAGTGC
Burkholderia cepacia strain CMCC(B)23005 chromosome 3, complete sequence.
CP090610.1:855137-855154
CAGGTTGCGCGTGTCGGGCGGCAACTCGGC855137CAGGACCAGCGACAGGACGGTGAACAGCACGGCGGTGTCGCCGGCCTG
Burkholderia cepacia strain 2017Y70952565VI chromosome 2, complete sequence.
CP090699.1:4055217-4055234
CAGGTTGCGCGTGTCGGGCGGCAACTCGGC4055217CAGGACCAGCGACAGGACGGTGAACAGCACGGCGGTATCGCCGGCCTG
Burkholderia cepacia strain 2011Ycf427V chromosome 3, complete sequence.
CP090739.1:416195-416212
CAGGTTGCGCGTGTCGGGCGGCAACTCGGC416195CAGGACCAGCGACAGGACGGTGAACAGCACGGCGGTATCGCCGGCCTG
Aeromicrobium duanguangcaii strain zg-Y50 chromosome, complete genome.
CP101990.1:1973491-1973508
CGGCACCTCGCTCGTGCATGCGGTCAGAGC1973491CAGGACCAGCGACAGGACGGCGACGGTTCGTCTCACCGGTCCATCCTC
Burkholderia cepacia strain N3009-2YT chromosome 3, complete sequence.
CP102331.1:416851-416868
CAGGTTGCGCGTGTCGGGCGGCAACTCGGC416851CAGGACCAGCGACAGGACGGTGAACAGCACGGCGGTGTCGCCGGCCTG
Brucella anthropi strain CGMCC 1.17299 chromosome 2, complete sequence.
CP103346.1:1429868-1429885
GCGCGATGCCGTCGAGATCGTGTAGCCGAG1429868CAGGACCAGCGACAGGACGAAGATCAGCACGCAGGTCAGGAGAAGTGC
Streptomyces caniferus strain NBC_00337 chromosome, complete genome.
CP108005.1:627000-627017
GCCGCCCGAGGCGGTGAGCTGCAGGATGAG627000CAGGACCAGCGACAGGACGTCGCCGGGCACCCCGAAGACGGTGCGCAG
Streptomyces caniferus strain NBC_00270 chromosome, complete genome.
CP108073.1:637429-637446
GCCGCCCGAGGCGGTGAGCTGCAGGATGAG637429CAGGACCAGCGACAGGACGTCGCCGGGCACCCCGAAGACGGTGCGCAG
Streptomyces sp. NBC_01283 chromosome, complete genome.
CP108430.1:6100500-6100517
CATGGACCAGCCGTCGCCCGCGATGTGGTG6100500CAGGACCAGCGACAGGACGTGCTCGGTCGCACCGAGCCTGAACAGGCT
Streptomyces lydicus strain NBC_00722 chromosome, complete genome.
CP108989.1:8238752-8238769
GCCGCCCGAGGCGGTGAGCTGCAGGATGAG8238752CAGGACCAGCGACAGGACGTCGCCGGGAACCCCGAACACGGTGCGCAG
Streptomyces decoyicus strain NBC 01774 chromosome, complete genome.
CP109106.1:402106-402123
CCCGCCGGAGGCGGTGAGCTGGAGGATGAG402106CAGGACCAGCGACAGGACGTCGCCCGGCACCCCGAAAAGGGTGCGCAG
Brucella sp. MAB-22 chromosome 1, complete sequence.
CP109781.1:685544-685561
GCGCGATGCCGTCGAGATCGTGTAGCCGAG685544CAGGACCAGCGACAGGACGAAGATCAGCACGCAGGTCAGGAGAAGTGC
Brucella sp. JSBI001 chromosome, complete genome.
CP110339.1:1887999-1888016
GCGCGATGCCGTCGAGATCGTGTAGCCGAG1887999CAGGACCAGCGACAGGACGAAGATCAGCACGCAGGTCAGGAGAAGTGC
Streptomyces sp. KN37 chromosome, complete genome.
CP139044.1:8119092-8119109
CCGGCCGAGGAGCGCGGCCAGCGCGGGCAC8119092CAGGACCAGCGACAGGACGAGCGCGGAGAGCAGGATGCCGAGCGTCGT
Streptomyces davawensis strain JCM 4913 complete genome.
HE971709.1:1342321-1342338
GGTCCGCGGGGCGAGGCCGCGCAGTCCGTA1342321CAGGACCAGCGACAGGACCGCGTAGATCATCAGGATGTCGCCGGGATA
Nonomuraea sp. ATCC 39727 isolate nono1 genome assembly, chromosome: I.
LT559118.1:4956999-4957016
CGGCACCATCATGCCGCTGAAGAACGTGCT4956999CAGGACCAGCGACAGGACCGTGACGCCGCGGTCGTCGAGCAGCCAGCA
Kitasatospora sp. DSM 114396 isolate DSM_114396 genome assembly, chromosome: 1.
OX419519.1:577240-577257
GACCAGGTTGCTGATGCCGATCAGGGCGAC577240CAGGACCAGCGACAGGACGCGGGAGAAGCGGTTCTGCCGGGTCATCCG
Steromphala cineraria genome assembly, chromosome: 4.
OU744723.1:7346593-7346610
CAGGAGCAGCGCAACGGCCAGCGCCAGTGA7346593CAGGACCAGCGACAGGACCAGCACCAGGACCAGCGCCATCGTGACCAG
Gibbula magus genome assembly, chromosome: 2.
OW388290.1:94328509-94328526
CAGCCTCAGGTCCAGCATCAGGACCAGCAT94328509CAGGACCAGCGACAGGACCAGCGCTTGGTTCTGTCTCAAGATCAGCGT
Gibbula magus genome assembly, chromosome: 3.
OW388291.1:78209811-78209828
CAGCATCAGGACCAACGGCAAGACCAACGA78209811CAGGACCAGCGACAGGACCAGCGACAGGACCAGCGCTTGGTTCTGTCT
Gibbula magus genome assembly, chromosome: 3.
OW388291.1:78209823-78209840
CAACGGCAAGACCAACGACAGGACCAGCGA78209823CAGGACCAGCGACAGGACCAGCGCTTGGTTCTGTCTCAAGATCAGCGT
Gibbula magus genome assembly, chromosome: 6.
OW388294.1:76191042-76191059
CAGCATCAGGACCAACGGCAAGACCAACGA76191042CAGGACCAGCGACAGGACCAGCGACAGGACCAGCGCTTGGTTCTGTCT
Gibbula magus genome assembly, chromosome: 6.
OW388294.1:76191054-76191071
CAACGGCAAGACCAACGACAGGACCAGCGA76191054CAGGACCAGCGACAGGACCAGCGCTTGGTTCTGTCTCAAGATCAGCGT
Gibbula magus genome assembly, chromosome: 12.
OW388300.1:15560777-15560794
CAACGGCAAGACCAACGACAGGAGCAGCGA15560777CAGGACCAGCGACAGGACCAGCGCTTGGTTCTGTCTCAAGATCAGCGT
Gibbula magus genome assembly, chromosome: 14.
OW388302.1:10102285-10102302
CAGCATCAGGACCAACGGCAAGACCAACGA10102285CAGGACCAGCGACAGGACCAGCGACAGGACCAGCGCTTGGTTCTGTCT
Gibbula magus genome assembly, chromosome: 14.
OW388302.1:10102297-10102314
CAACGGCAAGACCAACGACAGGACCAGCGA10102297CAGGACCAGCGACAGGACCAGCGCTTGGTTCTGTCTCAAGATCAGCGT
Gibbula magus genome assembly, chromosome: 16.
OW388304.1:15818147-15818164
ACTAACGGAGTGTGTGACCAAGACCAACGA15818147CAGGACCAGCGACAGGACCAGCGACAGGACCAGCGCTTGGTTCTGTCT
Gibbula magus genome assembly, chromosome: 16.
OW388304.1:15818159-15818176
TGTGACCAAGACCAACGACAGGACCAGCGA15818159CAGGACCAGCGACAGGACCAGCGCTTGGTTCTGTCTCAAGATCAGCGT
Gibbula magus genome assembly, chromosome: 17.
OW388305.1:8810853-8810870
GAGACTGTTACTAGTGAGCAGAGGCAGGAC8810853CAGGACCAGCGACAGGACCATCGTCAGGACCAGCGCTTGGATCTGTGT
Eupithecia vulgata genome assembly, chromosome: 17.
OX297876.1:4338183-4338200
TTTTTCGTTTTCTATCTAAATTCAGCCTAG4338183CAGGACCAGCGACAGGACTCTCGGAATTGCCCTCATTATGCGGGACAA
Drosophila histrio genome assembly, chromosome: 2.
OY282581.2:13527279-13527296
ACCTCCCACGACCAGGACCAGGACCAGGAC13527279CAGGACCAGCGACAGGACAACAGCAGTGACCAAGCTGGATGGTTGGAT
Drosophila obscura genome assembly, chromosome: 3.
OY757203.1:39779388-39779405
GAGAAGAGGACATCGGACCCCGACCAGAAC39779388CAGGACCAGCGACAGGACGGAACGGCAGCTGCAACAGCAGAAACGCTG
Drosophila obscura genome assembly, chromosome: 3.
OY757209.1:40073789-40073806
GAGAAGAGGACATCGGACCCCGACCAGAAC40073789CAGGACCAGCGACAGGACGGAACGGCAGCTGCAACAGCAGAAACGCTG
Microdon myrmicae genome assembly, chromosome: X.
OZ007500.1:69129972-69129989
ACCAAAACCGCCTTAGAAAAGGATGCAAGT69129972CAGGACCAGCGACAGGACAGAACAGACGTAACTAACCGCCGACGAGTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CAGGACcAGCGACAGGAc
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CAGGACcAGCGACAGGAc | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.575 | 0.566 | search_plus_done; http://172.18.8.135:50400/match?q=CAGGACCAGCGACAGGAC&k=0&no_gap=0&offset=0&limit=50
0.740 | 0.165 | search_minus_done; http://172.18.8.135:50400/match?q=GTCCTGTCGCTGGTCCTG&k=0&no_gap=0&offset=0&limit=0
0.740 | 0.000 | cgi_end;

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