GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 09:44:12, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

OPMF00622 Elaeis guineensis mature flower 26 cm Elaeis guineensis cDNA clone 122-E09-T3.seq, mRNA sequence.
EL684384.1:110-133
CAGGGACTCACAGCACAAACGCCTCACATC110CAGGCACCCAAACACAAACACAGATTGTAAGACCAACAACTGAAGCAGACTCTT
pOP-EO05890_EST_C_1_pSK_SK EO (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EO05890 5', mRNA sequence.
EY412159.1:109-132
CAGGGACTCACAGCACAAACGCCTCACATC109CAGGCACCCAAACACAAACACAGATTGTAAGACCAACAACTGAAGCAGACTCTT
OPSC01015 Elaeis guineensis Suspension cell cultures Elaeis guineensis cDNA clone 195-G11-T3.seq, mRNA sequence.
EL689241.1:707-730
AAGAGTCTGCTTCAGTTGTTGGTCTTACAA707TCTGTGTTTGTGTTTGGGTGCCTGGATGTGAGGCGTTTGTGCTGTGAGTCCCTG
pOP-EAP03177_EST_C_1_pBSK_SK EA (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EAP03177 5', mRNA sequence.
EY406866.1:450-473
AAGAGTCTGCTTCAGTTGTTGGTCTTACAA450TCTGTGTTTGTGTTTGGGTGCCTGGATGTGAGGCGTTTGTGCTGTGAGTCCCTG
TSA: Elaeis guineensis isotig08734.Elguifruit mRNA sequence.
JO095964.1:792-815
AAGAGTCTGCTTCAGTTGTTAGTCTTGCAA792TCTGTGTTTGTGTTTGGGTGCCTGGATGTGAGGCGTTTGTGCTGTGAGTCCCTG
Elaeis guineensis glutathione S-transferase (GST) mRNA, complete cds.
KC146054.1:801-824
AAGAGTCTGCTTCAGTTGTTAGTCTTGCAA801TCTGTGTTTGTGTTTGGGTGCCTGGATGTGAGGCGTTTGTGCTGTGAGTCCCTG
Elaeis guineensis glutathione s-transferase (GST) mRNA, complete cds.
KF516927.1:803-826
AAGAGTCTGCTTCAGTTGTTGGTCTTACAA803TCTGTGTTTGTGTTTGGGTGCCTGGATGTGAGGCGTTTGTGCTGTGAGTCCCTG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CAGGCACCCAAACACAAACACAGA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CAGGCACCCAAACACAAACACAGA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.212 | 0.203 | search_plus_done; http://172.18.8.135:50400/match?q=CAGGCACCCAAACACAAACACAGA&k=0&no_gap=0&offset=0&limit=50
0.360 | 0.149 | search_minus_done; http://172.18.8.135:50400/match?q=TCTGTGTTTGTGTTTGGGTGCCTG&k=0&no_gap=0&offset=0&limit=48
0.363 | 0.003 | cgi_end;

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