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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 11:50:49, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

TSA: Triticum aestivum cultivar Kukri KukriC16421_1 mRNA sequence.
JP923719.1:705-723
TGAAGAAGGCAAGGCCATGACCACTCAAGT705CAGGGTCGGTGGAGAGGATGGCAAACACAAACGATACAGAGAAAGACTG
Triticum aestivum genome assembly, chromosome: 3A.
LS992086.1:532470384-532470402
TGAAGAAGGCAAGGCCATGACCACTCAAGT532470384CAGGGTCGGTGGAGAGGATGGCAAACACAAACGATACAGAGAAAGAACG
Triticum turgidum subsp. durum genome assembly, chromosome: 3B.
LT934116.1:543124740-543124758
TGAAGAAGGCAAGGCCATGACCACTCAAGT543124740CAGGGTCGGTGGAGAGGATGGCAAACACAAACGATACAGAGAAAGACTG
Hordeum bulbosum genome assembly, chromosome: 2H_1.
OY737428.1:52215452-52215470
CCCGTTGTCGACGACAATGGTGGGGCGAGA52215452CAGGGTCGGTGGAGAGGATGTAGCAGGTGTCCCGGCGCCCTTGCCTCCT
Citrus sinensis genome assembly, chromosome: 9.
OY754326.1:3353013-3353031
TATGCACTTGTTTTCAAATACATAAAAATT3353013CAGGGTCGGTGGAGAGGATTCATGATGCACGTTCATTGAAAGAGCAAAT
Mus musculus molossinus genome assembly, chromosome: 5.
OW971662.1:115865013-115865031
CACTCAACTCCAGAAAAATCCAAGTCCAGA115865013ATCCTCTCCACCGACCCTGAGGACTGCCTGCCTCTCCAGTCCTTCTCCT
Mus spretus genome assembly, chromosome: 5.
OW971684.1:111044733-111044751
CACTCAACTCCAGGAAAATCCAAGTCCAGA111044733ATCCTCTCCACCGACCCTGAGGACCGCCTGCCTCTCCAGCCCTTCTCCT
Mus musculus castaneus genome assembly, chromosome: 5.
OW971839.1:108429704-108429722
CACTCAACTCCAGAAAAATCCAAGTCCAGA108429704ATCCTCTCCACCGACCCTGAGGACTGCCTGCCTCTCCAGCTCTTCTCCT
Sorex araneus clone SA_Ba-207C2, WORKING DRAFT SEQUENCE, 12 ordered pieces.
AC148377.3:61999-62017
TGGCTTCAGGGCAGCCGCCCAGACAGTGCC61999ATCCTCTCCACCGACCCTGTGCTCACAGATGCCCCCACGGGCCCCATCT
Citrus reticulata microsatellite DNA, locus mCrCIR01E02, allele 01E02-ga(16).
AM489735.1:162-180
ATTTGCTGTTTCAATGAACGTGCATCATGA162ATCCTCTCCACCGACCCTGAATTTTTATGTATTTGACAACCAGTTAGTC
Aegilops umbellulata cultivar TA1851 chromosome 3U.
CP136056.1:381552626-381552644
CAGTCTTTCTCTGTATCGTTTGTGTTTGCC381552626ATCCTCTCCACCGACCCTGACTTGAGTGGTCATGGCCTTGCCTTCTTCA
Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
HG670306.1:536159639-536159657
CAGTCTTTCTCTGTATCGTTTGTGTTTGCC536159639ATCCTCTCCACCGACCCTGACTTGAGTGGTCATGGCCTTGCCTTCTTCA
Triticum aestivum genome assembly, chromosome: 3A.
LR862514.1:551785355-551785373
CGTTCTTTCTCTGTATCGTTTGTGTTTGCC551785355ATCCTCTCCACCGACCCTGACTTGAGTGGTCATGGCCTTGCCTTCTTCA
Triticum aestivum genome assembly, chromosome: 3B.
LR862515.1:563841638-563841656
CAGTCTTTCTCTGTATCGTTTGTGTTTGCC563841638ATCCTCTCCACCGACCCTGACTTGAGTGGTCATGGCCTTGCCTTCTTCA
Triticum aestivum genome assembly, chromosome: 3A.
LR862535.1:545183109-545183127
CGTTCTTTCTCTGTATCGTTTGTGTTTGCC545183109ATCCTCTCCACCGACCCTGACTTGAGTGGTCATGGCCTTGCCTTCTTCA
Triticum aestivum genome assembly, chromosome: 3B.
LR862536.1:553211159-553211177
CAGTCTTTCTCTGTATCGTTTGTGTTTGCC553211159ATCCTCTCCACCGACCCTGACTTGAGTGGTCATGGCCTTGCCTTCTTCA
Triticum aestivum genome assembly, chromosome: 3A.
LR862556.1:548151252-548151270
CGTTCTTTCTCTGTATCGTTTGTGTTTGCC548151252ATCCTCTCCACCGACCCTGACTTGAGTGGTCATGGCCTTGCCTTCTTCA
Triticum aestivum genome assembly, chromosome: 3B.
LR862557.1:599204552-599204570
CAGTCTTTCTCTGTATCGTTTGTGTTTGCC599204552ATCCTCTCCACCGACCCTGACTTGAGTGGTCATGGCCTTGCCTTCTTCA
Triticum aestivum genome assembly, chromosome: 3A.
LR865464.1:539047166-539047184
CGTTCTTTCTCTGTATCGTTTGTGTTTGCC539047166ATCCTCTCCACCGACCCTGACTTGAGTGGTCATGGCCTTGCCTTCTTCA
Triticum aestivum genome assembly, chromosome: 3B.
LR865465.1:564237276-564237294
CAGTCTTTCTCTGTATCGTTTGTGTTTGCC564237276ATCCTCTCCACCGACCCTGACTTGAGTGGTCATGGCCTTGCCTTCTTCA
Triticum aestivum genome assembly, chromosome: 3A.
LR865485.1:541473341-541473359
CGTTCTTTCTCTGTATCGTTTGTGTTTGCC541473341ATCCTCTCCACCGACCCTGACTTGAGTGGTCATGGCCTTGCCTTCTTCA
Triticum aestivum genome assembly, chromosome: 3B.
LR865486.1:550186272-550186290
CAGTCTTTCTCTGTATCGTTTGTGTTTGCC550186272ATCCTCTCCACCGACCCTGACTTGAGTGGTCATGGCCTTGCCTTCTTCA
Triticum aestivum genome assembly, chromosome: 3A.
LR865506.1:554110499-554110517
CGTTCTTTCTCTGTATCGTTTGTGTTTGCC554110499ATCCTCTCCACCGACCCTGACTTGAGTGGTCATGGCCTTGCCTTCTTCA
Triticum aestivum genome assembly, chromosome: 3B.
LR865507.1:567297548-567297566
CAGTCTTTCTCTGTATCGTTTGTGTTTGCC567297548ATCCTCTCCACCGACCCTGACTTGAGTGGTCATGGCCTTGCCTTCTTCA
Triticum aestivum genome assembly, chromosome: 3A.
LR865745.1:555243691-555243709
CGTTCTTTCTCTGTATCGTTTGTGTTTGCC555243691ATCCTCTCCACCGACCCTGACTTGAGTGGTCATGGCCTTGCCTTCTTCA
Triticum aestivum genome assembly, chromosome: 3B.
LR865746.1:563551846-563551864
CAGTCTTTCTCTGTATCGTTTGTGTTTGCC563551846ATCCTCTCCACCGACCCTGACTTGAGTGGTCATGGCCTTGCCTTCTTCA
Triticum aestivum genome assembly, chromosome: 3A.
LR865766.1:547149509-547149527
CGTTCTTTCTCTGTATCGTTTGTGTTTGCC547149509ATCCTCTCCACCGACCCTGACTTGAGTGGTCATGGCCTTGCCTTCTTCA
Triticum aestivum genome assembly, chromosome: 3B.
LR865767.1:546189667-546189685
CAGTCTTTCTCTGTATCGTTTGTGTTTGCC546189667ATCCTCTCCACCGACCCTGACTTGAGTGGTCATGGCCTTGCCTTCTTCA
Triticum aestivum genome assembly, chromosome: 3A.
LR877315.1:550429726-550429744
CGTTCTTTCTCTGTATCGTTTGTGTTTGCC550429726ATCCTCTCCACCGACCCTGACTTGAGTGGTCATGGCCTTGCCTTCTTCA
Triticum aestivum genome assembly, chromosome: 3B.
LR877316.1:558480246-558480264
CAGTCTTTCTCTGTATCGTTTGTGTTTGCC558480246ATCCTCTCCACCGACCCTGACTTGAGTGGTCATGGCCTTGCCTTCTTCA
Triticum aestivum genome assembly, chromosome: 3A.
LR878441.1:553172672-553172690
CGTTCTTTCTCTGTATCGTTTGTGTTTGCC553172672ATCCTCTCCACCGACCCTGACTTGAGTGGTCATGGCCTTGCCTTCTTCA
Triticum aestivum genome assembly, chromosome: 3B.
LR878442.1:561450567-561450585
CAGTCTTTCTCTGTATCGTTTGTGTTTGCC561450567ATCCTCTCCACCGACCCTGACTTGAGTGGTCATGGCCTTGCCTTCTTCA
Aegilops sharonensis genome assembly, chromosome: 3S.
LR880968.1:649606268-649606286
CAGTCTTTCTCTGTATCGTTTGTGTTTGCC649606268ATCCTCTCCACCGACCCTGACTTGAGTGGTCATGGCCTTGCCTTCTTCA
Aegilops longissima genome assembly, chromosome: 3S.
LR881071.1:621772413-621772431
CAGTCTTTCTCTGTATCGTTTGTGTTTGCC621772413ATCCTCTCCACCGACCCTGACTTGAGTGGTCATGGCCTTGCCTTCTTCA
Triticum aestivum genome assembly, chromosome: 3B.
LS992087.1:545048877-545048895
CAGTCTTTCTCTGTATCGTTTGTGTTTGCC545048877ATCCTCTCCACCGACCCTGACTTGAGTGGTCATGGCCTTGCCTTCTTCA
Triticum turgidum subsp. durum genome assembly, chromosome: 3A.
LT934115.1:543703599-543703617
CGTTCTTTCTCTGTATCGTTTGTGTTTGCC543703599ATCCTCTCCACCGACCCTGACTTGAGTGGTCATGGCCTTGCCTTCTTCA
Triticum aestivum genome assembly, chromosome: 3A.
OU015727.1:550665604-550665622
CGTTCTTTCTCTGTATCGTTTGTGTTTGCC550665604ATCCTCTCCACCGACCCTGACTTGAGTGGTCATGGCCTTGCCTTCTTCA
Triticum aestivum genome assembly, chromosome: 3B.
OU015728.1:561936948-561936966
CAGTCTTTCTCTGTATCGTTTGTGTTTGCC561936948ATCCTCTCCACCGACCCTGACTTGAGTGGTCATGGCCTTGCCTTCTTCA
Triticum aestivum genome assembly, chromosome: 3A.
OU343171.1:553132656-553132674
CGTTCTTTCTCTGTATCGTTTGTGTTTGCC553132656ATCCTCTCCACCGACCCTGACTTGAGTGGTCATGGCCTTGCCTTCTTCA
Triticum aestivum genome assembly, chromosome: 3B.
OU343178.1:564738041-564738059
CAGTCTTTCTCTGTATCGTTTGTGTTTGCC564738041ATCCTCTCCACCGACCCTGACTTGAGTGGTCATGGCCTTGCCTTCTTCA
Triticum aestivum genome assembly, chromosome: 3B.
OU963879.1:560848858-560848876
CAGTCTTTCTCTGTATCGTTTGTGTTTGCC560848858ATCCTCTCCACCGACCCTGACTTGAGTGGTCATGGCCTTGCCTTCTTCA
Triticum aestivum genome assembly, chromosome: 3A.
OV100743.1:548057440-548057458
CGTTCTTTCTCTGTATCGTTTGTGTTTGCC548057440ATCCTCTCCACCGACCCTGACTTGAGTGGTCATGGCCTTGCCTTCTTCA
Triticum aestivum genome assembly, chromosome: 3B.
OV100744.1:564896307-564896325
CAGTCTTTCTCTGTATCGTTTGTGTTTGCC564896307ATCCTCTCCACCGACCCTGACTTGAGTGGTCATGGCCTTGCCTTCTTCA
Triticum aestivum genome assembly, chromosome: 3A.
OW530316.1:548057440-548057458
CGTTCTTTCTCTGTATCGTTTGTGTTTGCC548057440ATCCTCTCCACCGACCCTGACTTGAGTGGTCATGGCCTTGCCTTCTTCA
Triticum aestivum genome assembly, chromosome: 3B.
OW530317.1:564896307-564896325
CAGTCTTTCTCTGTATCGTTTGTGTTTGCC564896307ATCCTCTCCACCGACCCTGACTTGAGTGGTCATGGCCTTGCCTTCTTCA
Chionographis japonica genome assembly, chromosome: 7.
OX393555.1:37407196-37407214
CGCCGACCGGCTATAGCTCCGTCCGACCGG37407196ATCCTCTCCACCGACCCTGCCGCGTCACGTCGTCGCTCCGACCAGTGCC
Triticum aestivum genome assembly, chromosome: 3A.
OX637231.1:457296639-457296657
CGTTCTTTCTCTGTATCGTTTGTGTTTGCC457296639ATCCTCTCCACCGACCCTGACTTGAGTGGTCATGGCCTTGCCTTCTTCA
Triticum aestivum genome assembly, chromosome: 3B.
OX637232.1:488335669-488335687
CAGTCTTTCTCTGTATCGTTTGTGTTTGCC488335669ATCCTCTCCACCGACCCTGACTTGAGTGGTCATGGCCTTGCCTTCTTCA
Triticum monococcum genome assembly, chromosome: 3A.
OY737852.1:604287478-604287496
CGGTCTTTCTCTGTATCGTTTGTGTTTGCC604287478ATCCTCTCCACCGACCCTGACTTGAGTGGTCATGGCCTTGCCTTCTCCA
Triticum timopheevii genome assembly, chromosome: 3At.
OY997265.1:535350153-535350171
CGTTCTTTCTCTGTATCGTTTGTGTTTGCC535350153ATCCTCTCCACCGACCCTGACTTGAGTGGTCATGGCCTTGCCTTCTTCA
Triticum timopheevii genome assembly, chromosome: 3G.
OY997266.1:456222047-456222065
CAGTCTTTCTCTGTATCGTTTGTGTTTGCC456222047ATCCTCTCCACCGACCCTGACTTGAGTGGTCATGGCCTTGCCTTCTTCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CAGGGTCGGTGGAGAGGAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CAGGGTCGGTGGAGAGGAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.160 | 0.151 | search_plus_done; http://172.18.8.135:50400/match?q=CAGGGTCGGTGGAGAGGAT&k=0&no_gap=0&offset=0&limit=50
0.291 | 0.131 | search_minus_done; http://172.18.8.135:50400/match?q=ATCCTCTCCACCGACCCTG&k=0&no_gap=0&offset=0&limit=45
0.321 | 0.030 | cgi_end;

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