GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 19:30:50, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Spinacia oleracea subsp. turkestanica cultivar PI494751 chromosome X.
CP130739.1:35743323-35743342
ACGGTTTTGTCTGTGTTGAACTGTCATCAT35743323CAGGTTCCATCTGCTTATCCAATTCAGCATCATCATCGTCTTGTGATTCA
Spinacia oleracea subsp. turkestanica cultivar PI494751 chromosome Y.
CP130887.1:35244883-35244902
ACGGTTTTGTCTGTGTTGAACTGTCATCAT35244883CAGGTTCCATCTGCTTATCCAATTCAGCATCATCATCGTCTTGTGATTCA
Chenopodium album genome assembly, chromosome: 4.
OX419211.1:21287076-21287095
ATGGTTTTGTATCTGTTGAATTGTCTTCAT21287076CAGGTTCCATCTGCTTATCCAATTCAGCATCATCATCTTGTGAGTCACTC
Heliconius sara genome assembly, chromosome: 3.
OU860782.2:518115-518134
GGAACGGAGTATCTTAACAATAGGTTCCCT518115CAGGTTCCATCTGCTTATCCTGCTATGTTGCGGTACGGCAAGAAGCTAAA
Sylvilagus floridanus genome assembly, chromosome: 3.
OX463225.1:132526315-132526334
TTTCTCCAAGAAAAAAAATACAATTTATGA132526315GGATAAGCAGATGGAACCTGAAGTAAATTAATCAGAAAAATTGATTATCC
Chenopodium album genome assembly, chromosome: 13.
OX419220.1:17000765-17000784
GAGTGACTCACAAGATGATGATGCTGAATT17000765GGATAAGCAGATGGAACCTGATGAAGACAATTCAACAGATACAAAACCAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CAGGTTCCATCTGCTTATCC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CAGGTTCCATCTGCTTATCC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.157 | 0.148 | search_plus_done; http://172.18.8.135:50400/match?q=CAGGTTCCATCTGCTTATCC&k=0&no_gap=0&offset=0&limit=50
0.209 | 0.052 | search_minus_done; http://172.18.8.135:50400/match?q=GGATAAGCAGATGGAACCTG&k=0&no_gap=0&offset=0&limit=46
0.210 | 0.001 | cgi_end;

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