GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 02:32:43, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Linum usitatissimum chromosome Lu1.
CP027619.1:7093014-7093032
CACCTACTCACCACCCTAGCTAAGTCCTCC7093014CAGTCCGGCCATCCCTAACCGCTAGATCCAGTTCAGAAAATATGATCGA
Avena insularis genome assembly, chromosome: 7C.
OU342344.1:351923856-351923874
AGATCACTATCGGGACGGTCCGGGGCCGGT351923856GGTAGGGATGGCCGGACTGGTTGTGGCGTGGTGGTCAATATATGCCTGG
Avena sativa genome assembly, chromosome: 7C.
OU342391.1:375535938-375535956
AGATCACTATCGGGACGGTCCGGGGCCGGT375535938GGTAGGGATGGCCGGACTGGTTGTGGCGTGGTGGTCAATATATGCCTGG
Avena eriantha genome assembly, chromosome: 7C.
OU342746.1:108163769-108163787
AGATCACTATTGGGACGGTCCAGGGCCGGT108163769GGTAGGGATGGCCGGACTGGTTGTGGCGCGGTGGTCAATATATGCCTGG
Avena sativa genome assembly, chromosome: 14.
OV702292.1:408646766-408646784
AGATCACTATCGGGACGGTCCGGGGCCGGT408646766GGTAGGGATGGCCGGACTGGTTGTGGCGTGGTGGTCAATATATGCCTGG
Streptomyces sp. NBC_01176 chromosome, complete genome.
CP108600.1:1866676-1866694
ACCAGGTCGAGAAGGTGTCGACGACGTTCT1866676GGTAGGGATGGCCGGACTGGAAGCCGCCGGAGTGCACGGTGCCGGTCGT
Bedellia somnulentella genome assembly, chromosome: 10.
OY755180.1:535221-535239
TCGACCTTGGCTTGCGAAATCTGTGAGGTG535221GTTAGGGATGGCCGGACTGGTTCGGGTTGTGCAATGTTTGGGTGACTGG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CAGTCCGGCCATCCCTAMC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CAGTCCGGCCATCCCTAMC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.363 | 0.354 | search_plus_done; http://172.18.8.135:50400/match?q=CAGTCCGGCCATCCCTAMC&k=0&no_gap=0&offset=0&limit=50
0.460 | 0.097 | search_minus_done; http://172.18.8.135:50400/match?q=GKTAGGGATGGCCGGACTG&k=0&no_gap=0&offset=0&limit=49
0.464 | 0.004 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).