GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 17:45:06, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Bos mutus isolate yakQH1 chromosome 16.
CP027084.1:6101974-6101993
AAGTGAAGCAGCATCTATGTGAGACACAGA6101974CAGTTGAGCTTACCTCCAGGGGACACAGAGGTGGCTCCTCAGCCCTGACC
Bos taurus genome assembly, chromosome: 16.
LR962746.1:6744751-6744770
GAATTGGAAAGCCTTTAATGTGGCCACAGA6744751CAGTTGAGCTTACCTCCAGGGGTCGGAGGGCCGATTTCCTCAGCCTCGGC
Bos taurus genome assembly, chromosome: 16.
LR962746.1:6880827-6880846
AGTGAAGGAGCAGTCTTTGTGAGACACAGA6880827CAGTTGAGCTTACCTCCAGGGGTGGCAGAGGCAGATCCTCAGCCCTGGCC
Bos taurus genome assembly, chromosome: 16.
LR962746.1:7016737-7016756
AAGTGAAGCAGCATCTATGTGAGACACAGA7016737CAGTTGAGCTTACCTCCAGGGGACACAAAGGTGGCTCCTCAGCCCCGACC
Bos taurus genome assembly, chromosome: 18.
LR962748.1:60053857-60053876
GTGAAACAATAATCTTATCCTAGATTAAGG60053857CAGTTGAGCTTACCTCCAGGGTACTCAGAGACTGTTCCTCCGCCCAGTCC
Bos taurus genome assembly, chromosome: X.
LR962768.1:51963765-51963784
AGAAGTGAGAAGCATCTATGTGAGACACAA51963765CAGTTGAGCTTACCTCCAGGGGTTGGAGAGGCGATTCCTCAGCCTCGCCT
Bos taurus genome assembly, chromosome: 16.
LR962871.1:74298412-74298431
AAGTGAAACAGCATCTATGTGAGACACAGA74298412CAGTTGAGCTTACCTCCAGGGGTCGGAGAGGCGGTTCCTCAGCCCCGGCC
Bos taurus genome assembly, chromosome: 16.
LR962871.1:74964535-74964554
AAGTGAAGCAGGATCTATGTGAGACACAAA74964535CAGTTGAGCTTACCTCCAGGGTTCGGAGAGGTGTTTCCTCAGCCCCAGCC
Bos taurus genome assembly, chromosome: 16.
LR962871.1:74969121-74969140
GAGTGAAGAAGCATTTATGTGAGACACAGA74969121CAGTTGAGCTTACCTCCAGGGGTCGGAGAGGCGATTCCTCAGCCCCGGCC
Bos taurus genome assembly, chromosome: 16.
LR962871.1:74973693-74973712
AAGTGAAGAAGCATCTATGTGAGACACAGA74973693CAGTTGAGCTTACCTCCAGGGGTGGAGAGGCGATTCCTCAGCCTCGGCCT
Bos taurus genome assembly, chromosome: 16.
LR962871.1:74978257-74978276
AAGTGAAGAAGCATCTATGTGAGACACAGA74978257CAGTTGAGCTTACCTCCAGGGGTTGGAGAGGCGATTCCTCAGCCTCGGCC
Bos taurus genome assembly, chromosome: 16.
LR962871.1:74981606-74981625
AAGTGAAGAAGCATCTATGTGAGACACAGA74981606CAGTTGAGCTTACCTCCAGGGGTTGGAGAGGCGATTCCTCAGCCTCGGCC
Bos gaurus x Bos taurus genome assembly, chromosome: 16.
OX258970.1:8887154-8887173
AAGTGAAGAAGCATCTATGTGAGACACAGA8887154CAGTTGAGCTTACCTCCAGGGGTCGGAGAGGCGATTCCTCAGCCTCAGCC
Bos gaurus x Bos taurus genome assembly, chromosome: 16.
OX258970.1:9747917-9747936
AAGTGAAGCAGGATCTATGTGAGACACAGA9747917CAGTTGAGCTTACCTCCAGGGGTCGGAGAGGTGATTCCTTAGCCCCAGCC
Bos gaurus x Bos taurus genome assembly, chromosome: 16.
OX258970.1:9752505-9752524
AAGTGAAGCAGGATCTATGTGAGACACAGA9752505CAGTTGAGCTTACCTCCAGGGGTCGGAGAGGTGATTCCTTAGCCCCAGCC
Bos gaurus x Bos taurus genome assembly, chromosome: 16.
OX258970.1:9884555-9884574
AGTGAAGGAGCAGTCTTTGTGAGACACAGA9884555CAGTTGAGCTTACCTCCAGGGGTGGCAGAGGCAGATCCTCAGCCCTGGCC
Bos gaurus x Bos taurus genome assembly, chromosome: 16.
OX258970.1:10022815-10022834
AAGTGAAGCAGCATCTATGTGAGACACAGA10022815CAGTTGAGCTTACCTCCAGGGGACACAAAGGTGGCTCCTCAGCCCCGACC
Bos gaurus x Bos taurus genome assembly, chromosome: 18.
OX258972.1:61906361-61906380
GTGAAACAATAATCTTATCCTAGATTAAGG61906361CAGTTGAGCTTACCTCCAGGGTACTCAGAGACTGTTCCTCCGCCCAGTCC
Bos taurus strain mammals genome assembly, chromosome: 16.
OX344705.1:11663038-11663057
AAGTGAAGAAGCATCTATGTGAGACACAGA11663038CAGTTGAGCTTACCTCCAGGGGTCGGAGAGGCGATTCCTCAGCCTCAGCC
Bos taurus strain mammals genome assembly, chromosome: 16.
OX344705.1:12627049-12627068
AAGTGAAGCAGGATCTATGTGAGACACAGA12627049CAGTTGAGCTTACCTCCAGGGGTCGGAGAGGTGATTCCTTAGCCCCAGCC
Bos taurus strain mammals genome assembly, chromosome: 16.
OX344705.1:12631637-12631656
AAGTGAAGCAGGATCTATGTGAGACACAGA12631637CAGTTGAGCTTACCTCCAGGGGTCGGAGAGGTGATTCCTTAGCCCCAGCC
Bos taurus strain mammals genome assembly, chromosome: 16.
OX344705.1:12763680-12763699
AGTGAAGGAGCAGTCTTTGTGAGACACAGA12763680CAGTTGAGCTTACCTCCAGGGGTGGCAGAGGCAGATCCTCAGCCCTGGCC
Bos taurus strain mammals genome assembly, chromosome: 16.
OX344705.1:12901946-12901965
AAGTGAAGCAGCATCTATGTGAGACACAGA12901946CAGTTGAGCTTACCTCCAGGGGACACAAAGGTGGCTCCTCAGCCCCGACC
Bos taurus genome assembly, chromosome: Bta16.
OY997244.1:7871120-7871139
AAGTGAAGAAGCATCTATGTGAGACACAGA7871120CAGTTGAGCTTACCTCCAGGGGTCGGAGAGGTGATTCCTCAGCCTCGGCC
Bos taurus genome assembly, chromosome: Bta16.
OY997244.1:7875643-7875662
AAGTGAAGAAGCATCTATGTGAGACACAGA7875643CAGTTGAGCTTACCTCCAGGGGTCGGAGAGGTGATTCCTCAGCCTCGGCC
Bos taurus genome assembly, chromosome: Bta16.
OY997244.1:8131339-8131358
AAGTGAAGCAGGATCTACGTGAGACACAGA8131339CAGTTGAGCTTACCTCCAGGGGTTGGAGAGGTGATTCCTCAGCCCCAGCC
Bos taurus genome assembly, chromosome: Bta16.
OY997244.1:8135931-8135950
AAGTGAAGAAGCATCTATGTGAGACACAGA8135931CAGTTGAGCTTACCTCCAGGGGTTGGAGAGGCGATTCCTCAGCCTCGGCC
Bos taurus genome assembly, chromosome: Bta16.
OY997244.1:8140526-8140545
AAGTGAAGAAGCATCTATGTGAGACACAGA8140526CAGTTGAGCTTACCTCCAGGGGTTGGAGAGGCGATTCCTCAGCCTCGGCC
Bos taurus genome assembly, chromosome: Bta16.
OY997244.1:8145121-8145140
AAGTGAAGAAGCATCTATGTGAGACACAGA8145121CAGTTGAGCTTACCTCCAGGGGTTGGAGAGGCGATTCCTCAGCCTCGGCC
Bos taurus genome assembly, chromosome: Bta16.
OY997244.1:8149709-8149728
AAGTGAAGAAGCATCTATGTGAGACACAGA8149709CAGTTGAGCTTACCTCCAGGGGTTGGAGAGGCGATTCCTCAGCCTCGGCC
Bos taurus genome assembly, chromosome: Bta16.
OY997244.1:9115041-9115060
AAGTGAAGCAGGATCTATGTGAGACACAGA9115041CAGTTGAGCTTACCTCCAGGGGTCGGAGAGGTGATTCCTTAGCCCCAGCC
Bos taurus genome assembly, chromosome: Bta16.
OY997244.1:9119629-9119648
AAGTGAAGCAGGATCTATGTGAGACACAGA9119629CAGTTGAGCTTACCTCCAGGGGTCGGAGAGGTGATTCCTTAGCCCCAGCC
Bos taurus genome assembly, chromosome: Bta16.
OY997244.1:9251693-9251712
AGTGAAGGAGCAGTCTTTGTGAGACACAGA9251693CAGTTGAGCTTACCTCCAGGGGTGGCAGAGGCAGATCCTCAGCCCTGGCC
Bos taurus genome assembly, chromosome: Bta16.
OY997244.1:9386053-9386072
AAGTGAAGCAGCATCTATGTGAGACACAGA9386053CAGTTGAGCTTACCTCCAGGGGACACAAAGGTGGCTCCTCAGCCCCGACC
Sequence 2045 from Patent WO2008034648.
FB782772.1:31-50
ATGGGAGTTAGAGAGAAGGATCCGTTAGCC31CAGTTGAGCTTACCTCCAGGTTTTCGTTTTTACCCGACAGATGAAGAGCT
Sequence 2197 from Patent WO2008034648.
FB782924.1:65-84
ATGGGAGTTAGAGAGAAGGATCCGTTAGCC65CAGTTGAGCTTACCTCCAGGTTTTCGTTTTTACCCGACAGATGAAGAGCT
Sequence 7008 from Patent WO2008034648.
FB787735.1:31-50
ATGGGAGTTAGAGAGAAGGATCCGTTAGCC31CAGTTGAGCTTACCTCCAGGTTTTCGTTTTTACCCGACAGATGAAGAGCT
Sequence 7076 from Patent WO2008034648.
FB787803.1:65-84
ATGGGAGTTAGAGAGAAGGATCCGTTAGCC65CAGTTGAGCTTACCTCCAGGTTTTCGTTTTTACCCGACAGATGAAGAGCT
Sequence 15428 from patent US 8030546.
GY467653.1:72-91
ATGGGAGTTAGAGAGAAGGATCCGTTAGCC72CAGTTGAGCTTACCTCCAGGTTTTCGTTTTTACCCGACAGATGAAGAGCT
Sequence 2045 from Patent EP2090662.
HB652831.1:31-50
ATGGGAGTTAGAGAGAAGGATCCGTTAGCC31CAGTTGAGCTTACCTCCAGGTTTTCGTTTTTACCCGACAGATGAAGAGCT
Sequence 2197 from Patent EP2090662.
HB652983.1:65-84
ATGGGAGTTAGAGAGAAGGATCCGTTAGCC65CAGTTGAGCTTACCTCCAGGTTTTCGTTTTTACCCGACAGATGAAGAGCT
Sequence 7008 from Patent EP2090662.
HB657794.1:31-50
ATGGGAGTTAGAGAGAAGGATCCGTTAGCC31CAGTTGAGCTTACCTCCAGGTTTTCGTTTTTACCCGACAGATGAAGAGCT
Sequence 7076 from Patent EP2090662.
HB657862.1:65-84
ATGGGAGTTAGAGAGAAGGATCCGTTAGCC65CAGTTGAGCTTACCTCCAGGTTTTCGTTTTTACCCGACAGATGAAGAGCT
Sequence 499 from Patent EP2183371.
HI543088.1:88-107
ATGGGAGTTAGAGAGAAGGATCCGTTAGCC88CAGTTGAGCTTACCTCCAGGTTTTCGTTTTTACCCGACAGATGAAGAGCT
Sequence 499 from patent US 8686227.
HJ918652.1:88-107
ATGGGAGTTAGAGAGAAGGATCCGTTAGCC88CAGTTGAGCTTACCTCCAGGTTTTCGTTTTTACCCGACAGATGAAGAGCT
Sequence 499 from Patent EP2910638.
JE864175.1:88-107
ATGGGAGTTAGAGAGAAGGATCCGTTAGCC88CAGTTGAGCTTACCTCCAGGTTTTCGTTTTTACCCGACAGATGAAGAGCT
Sequence 499 from patent US 10155957.
MM471932.1:88-107
ATGGGAGTTAGAGAGAAGGATCCGTTAGCC88CAGTTGAGCTTACCTCCAGGTTTTCGTTTTTACCCGACAGATGAAGAGCT
Sequence 15428 from patent US 10597667.
MO978806.1:72-91
ATGGGAGTTAGAGAGAAGGATCCGTTAGCC72CAGTTGAGCTTACCTCCAGGTTTTCGTTTTTACCCGACAGATGAAGAGCT
Sequence 499 from patent US 10961544.
MX514675.1:88-107
ATGGGAGTTAGAGAGAAGGATCCGTTAGCC88CAGTTGAGCTTACCTCCAGGTTTTCGTTTTTACCCGACAGATGAAGAGCT
Sequence 499 from patent US 10995341.
MX642125.1:88-107
ATGGGAGTTAGAGAGAAGGATCCGTTAGCC88CAGTTGAGCTTACCTCCAGGTTTTCGTTTTTACCCGACAGATGAAGAGCT
Brassica oleracea var. viridis mRNA, clone: KALE-055O19, 5' end sequence.
DK476920.1:103-122
ATGGGCATTAGAGAGAAGGATCCGTTAGCC103CAGTTGAGCTTACCTCCAGGTTTTCGTTTTTACCCGACAGATGAAGAGCT
Brassica oleracea var. viridis mRNA, clone: KALE-065C11, 5' end sequence.
DK480452.1:94-113
ATGGGCATTAGAGAGAAGGATCCGTTAGCC94CAGTTGAGCTTACCTCCAGGTTTTCGTTTTTACCCGACAGATGAAGAGCT
Brassica oleracea var. viridis mRNA, clone: KALE-140P01, 5' end sequence.
DK509442.1:90-109
ATGGGCATTAGAGAGAAGGATCCGTTAGCC90CAGTTGAGCTTACCTCCAGGTTTTCGTTTTTACCCGACAGATGAAGAGCT
BNYS4DCT_UP_018_D09_21MAR2005_073 Brassica napus seeds BNYS4DCT Brassica napus cDNA 5', mRNA sequence.
EE477298.1:88-107
ATGGGAGTTAGAGAGAAGGATCCGTTAGCC88CAGTTGAGCTTACCTCCAGGTTTTCGTTTTTACCCGACAGATGAAGAGCT
BMSA01-T7-28-H04 Brassica napus Full-length cDNA Library Brassica napus cDNA, mRNA sequence.
EG020090.1:96-115
ATGGGAGTTAGAGAGAAGGATNCGTTAGCC96CAGTTGAGCTTACCTCCAGGTTTTCGTTTTTACCCGACAGATGAAGAGCT
BMSA01-T7-13-F08 Brassica napus Full-length cDNA Library Brassica napus cDNA, mRNA sequence.
EG020835.1:100-119
ATGGGCATTAGAGAGAAGGATCCGTTAGCC100CAGTTGAGCTTACCTCCAGGTTTTCGTTTTTACCCGACAGATGAAGAGCT
BR100113 whole plant cDNA library KFYP Brassica rapa subsp. pekinensis cDNA clone KFYP-108H07 5', mRNA sequence.
EX113823.1:42-61
ATGGGAGTTAGAGAGAAGGATCCGTTAGCC42CAGTTGAGCTTACCTCCAGGTTTTCGTTTTTACCCGACAGATGAAGAGCT
TSA: Brassica rapa subsp. pekinensis RNA, contig: CF3_5490.
FX703686.1:112-131
ATGGGAGTTAGAGAGAAGGATCCGTTAGCC112CAGTTGAGCTTACCTCCAGGTTTTCGTTTTTACCCGACAGATGAAGAGCT
TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_32134.
FX739420.1:297-316
ATGGGAGTTAGAGAGAAGGATCCGTTAGCC297CAGTTGAGCTTACCTCCAGGTTTTCGTTTTTACCCGACAGATGAAGAGCT
KBrB041C13R KBrB, Brassica rapa BamHI BAC library Brassica rapa subsp. pekinensis genomic clone KBrB041C13, genomic survey sequence.
DX041165.1:8-27
GTTAGCC8CAGTTGAGCTTACCTCCAGGTTTTCGTTTTTACCCGACAGATGAAGAGCT
KBrB060A15F KBrB, Brassica rapa BamHI BAC library Brassica rapa subsp. pekinensis genomic clone KBrB060A15, genomic survey sequence.
DX055457.1:8-27
GTTAGCC8CAGTTGAGCTTACCTCCAGGTTTTCGTTTTTACCCGACAGATGAAGAGCT
Bos taurus clone CH240-48C12, WORKING DRAFT SEQUENCE, 25 unordered pieces.
AC156338.3:61737-61756
AGTGAAGGAGCAGTCTTTGTGAGACACAGA61737CAGTTGAGCTTACCTCCAGGGGTGGCAGAGGCAGATCCTCAGCCCTGGCC
Bos taurus clone CH240-101B5, WORKING DRAFT SEQUENCE, 16 unordered pieces.
AC162017.3:82728-82747
AAGTGAAACAGCATCTATGTGAGACACAGA82728CAGTTGAGCTTACCTCCAGGGGTCGGAGAGGCGGTTCCTCAGCCCTGGCC
Bos taurus clone CH240-178B22, WORKING DRAFT SEQUENCE, 27 unordered pieces.
AC165892.2:138419-138438
AAGTGAAGAAGCATCTATGTGAGACACAGA138419CAGTTGAGCTTACCTCCAGGGGTCGGAGGGGCGTTTCCTCAGCCTCAGCC
Bos taurus clone CH240-151H16, *** SEQUENCING IN PROGRESS ***, 14 unordered pieces.
AC171927.1:21838-21857
AAGTGAAGAAGCATCTATGTGAGACACAGA21838CAGTTGAGCTTACCTCCAGGGGTTGGAGAGGCGATTCCTCAGCCTCGGCC
Bos taurus clone CH240-263M20, WORKING DRAFT SEQUENCE, 33 unordered pieces.
AC172473.3:151674-151693
GTGAAACAATAATCTTATCCTAGATTAAGG151674CAGTTGAGCTTACCTCCAGGGTACTCAGAGACTGTTCCTCCGCCCAGTCC
Bos taurus clone CH240-291O11, WORKING DRAFT SEQUENCE, 14 unordered pieces.
AC218196.1:190385-190404
AAGTGAAGCAGCATCTATGTGAGACACAGA190385CAGTTGAGCTTACCTCCAGGGGACACAAAGGTGGCTCCTCAGCCCCGACC
Bos taurus clone CH240-330H7, WORKING DRAFT SEQUENCE, 20 unordered pieces.
AC219540.1:115282-115301
AAGTGAAGCAGGATCGATGTGAGACACAGA115282CAGTTGAGCTTACCTCCAGGGGTCGGAAAGGTGATTCCTCAGCCCCAGCC
Bos taurus clone CH240-330H7, WORKING DRAFT SEQUENCE, 20 unordered pieces.
AC219540.1:121167-121186
AAGTGAAGAAGCATCTATGTGAGACACAGA121167CAGTTGAGCTTACCTCCAGGGGTCGGAGAGGTGATTCCTCAGCCTCGGCC
Bos taurus clone CH240-330H7, WORKING DRAFT SEQUENCE, 20 unordered pieces.
AC219540.1:125698-125717
AAGTGAAGAAGCATCTATGTGAGACACAGA125698CAGTTGAGCTTACCTCCAGGGGTCGGAGAGGTGATTCCTCAGCCTCGGCC
Bos taurus clone CH240-330H7, WORKING DRAFT SEQUENCE, 20 unordered pieces.
AC219540.1:130288-130307
AAGTGAAGAAGCATCTATGTGAGACACAGA130288CAGTTGAGCTTACCTCCAGGGGTTGGAGAGGCGATTCCTCAGCCTCGGCC
Bos taurus clone CH240-364L14, WORKING DRAFT SEQUENCE, 13 unordered pieces.
AC220164.1:86983-87002
AAGTGAAGAAGCATCTATGTGAGACACAGA86983CAGTTGAGCTTACCTCCAGGGGTTGGAGAGGCGATTCCTCAGCCTCGGCC
Bos taurus clone CH240-364L14, WORKING DRAFT SEQUENCE, 13 unordered pieces.
AC220164.1:91574-91593
AAGTGAAGAAGCATCTATGTGAGACACAGA91574CAGTTGAGCTTACCTCCAGGGGTTGGAGAGGCGATTCCTCAGCCTCGGCC
Bos taurus clone CH240-364L14, WORKING DRAFT SEQUENCE, 13 unordered pieces.
AC220164.1:96159-96178
AAGTGAAGAAGCATCTATGTGAGACACAGA96159CAGTTGAGCTTACCTCCAGGGGTTGGAGAGGCGATTCCTCAGCCTCGGCC
Bos taurus clone CH240-364L14, WORKING DRAFT SEQUENCE, 13 unordered pieces.
AC220164.1:200588-200607
AAGTGAAGCAGGATCTACGTGAGACACAAA200588CAGTTGAGCTTACCTCCAGGGGTTGGAGAGGTGATTCCTCAGCCCCAGCC
Bos taurus clone CH240-478H20, WORKING DRAFT SEQUENCE, 18 unordered pieces.
AC224714.1:173562-173581
AAGTGAAGAAGCATCTATGTGAGACACAGA173562CAGTTGAGCTTACCTCCAGGGGTCGGAGAGGCGATTCCTCAGCCTCGGCC
Bos taurus clone CH240-478H20, WORKING DRAFT SEQUENCE, 18 unordered pieces.
AC224714.1:183256-183275
AAGTGAAGAAGCATCTATGTGAGACACAGA183256CAGTTGAGCTTACCTCCAGGGGTTGGAGAGGCGATTCCTCAGCCTCGGCC
Bos taurus clone CH240-478H20, WORKING DRAFT SEQUENCE, 18 unordered pieces.
AC224714.1:187834-187853
AAGTGAAGAAGCATCTATGTGAGACACAGA187834CAGTTGAGCTTACCTCCAGGGGTTGGAGAGGCGATTCCTCAGCCTCGGCC
Bos taurus clone CH240-478H20, WORKING DRAFT SEQUENCE, 18 unordered pieces.
AC224714.1:192424-192443
AAGTGAAGAAGCATCTATGTGAGACACAGA192424CAGTTGAGCTTACCTCCAGGGGTTGGAGAGGCGATTCCTCAGCCTCGGCC
Brassica napus NAC-domain protein 485 (NAC485) mRNA, complete cds.
AY245887.1:72-91
ATGGGAGTTAGAGAGAAGGATCCGTTAGCC72CAGTTGAGCTTACCTCCAGGTTTTCGTTTTTACCCGACAGATGAAGAGCT
Brassica napus NAC transcription factor 72 (NAC72.1) mRNA, complete cds.
KC966756.1:31-50
ATGGGAGTTAGAGAGAAGGATCCGTTAGCC31CAGTTGAGCTTACCTCCAGGTTTTCGTTTTTACCCGACAGATGAAGAGCT

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