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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:59:37, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Muntiacus reevesi genome assembly, chromosome: X.
OZ005628.1:106670337-106670356
TGAAAAAACAGAACTCATATTTGACATAAC106670337CATAAGAAAGTTCCAGAATGATAAATATACACTAAGCCTAAAGGATAACC
Erodium maritimum genome assembly, chromosome: 5.
OY997592.1:66314078-66314097
AAAATTTTGAGGGGGCAACCGAAGTGGCAG66314078CATAAGAAAGTTCCAGAATGTGACATCCCCGACATTGACCTCAACCTCGA
Noctua fimbriata genome assembly, chromosome: 17.
LR990938.1:1219006-1219025
TGTTAGTAATTGCTCAATTTAATCGCTTAC1219006CATAAGAAAGTTCCAGAATGAATAATCTTGCTTGTATCATTCGGCCTGGA
Noctua janthina genome assembly, chromosome: 14.
OY755064.1:1441125-1441144
TGCTAGCAATTGCTCAATGTAATCGCTCAC1441125CATAAGAAAGTTCCAGAATGAATAATCTTGCTTGTATCATTCGGCCTGGA
Ovis canadensis canadensis isolate 43U chromosome X sequence.
CP011912.1:83519731-83519750
GGTTACTCTTTAGGCCTACTGTACATTTGT83519731CATTCTGGAACTTTCTTATGGGTATGCTAAATATGAGTTCTGTTTTTTCA
Capricornis sumatraensis isolate serow.1 chromosome X.
CP135630.1:54020664-54020683
GGTTTCTCTTTAGGCCTAGTGTACATTTGT54020664CATTCTGGAACTTTCTTATGGGTATGCTAAATATGAGTTCTGTTTTTTCA
Cervus elaphus genome assembly, chromosome: X.
OU343077.1:68966440-68966459
GGTTATTCTTTAGGCCTAGTGTATATTTGT68966440CATTCTGGAACTTTCTTATGGTTATGTCAAATATGAGTTCTGTTTTTTCA
Gadus morhua genome assembly, chromosome: 2.
LR633944.1:21672255-21672274
CAGAAATGGTGAAAGTTTGCTATTGGTTGA21672255CATTCTGGAACTTTCTTATGTGTCGAATAGGCTTGGGAGTTGTTATGGTT
Leptidea sinapis genome assembly, chromosome: 1.
FR990154.1:26644028-26644047
TATTGACACAATTGATCCAACTTGCGTCGA26644028CATTCTGGAACTTTCTTATGTCGAAACAGCAAGCGTCGCAAATATGTAGA
Strongyloides stercoralis strain PV0001 genome assembly, scaffold: SSTP_contig0000005.
LL999055.1:436910-436929
AGAAATAAAAGTACAAAAATTATATTAAAC436910CATTCTGGAACTTTCTTATGAAATAATTAATGTTCATTTTTTTTTAAATA
Noctua janthe genome assembly, chromosome: 14.
OU342566.1:16917480-16917499
TCCAGGCCGAATGATACAAGCAAGATTATT16917480CATTCTGGAACTTTCTTATGGTGAGCGATTACATTGAGCAATTGCTAGCA
Lycophotia porphyrea genome assembly, chromosome: 13.
OX465396.1:17338059-17338078
TCCAGGCCGAACGATGCAAGCCAGATTATT17338059CATTCTGGAACTTTCTTATGTTAAGCGATTATACTTTGCGATAAGGTTTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CATAAGAAAGTTCCAGAATG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CATAAGAAAGTTCCAGAATG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.191 | 0.182 | search_plus_done; http://172.18.8.135:50400/match?q=CATAAGAAAGTTCCAGAATG&k=0&no_gap=0&offset=0&limit=50
0.322 | 0.131 | search_minus_done; http://172.18.8.135:50400/match?q=CATTCTGGAACTTTCTTATG&k=0&no_gap=0&offset=0&limit=46
0.327 | 0.005 | cgi_end;

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