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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
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2025-04-11 20:53:10, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

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UCRPT01_01bb08_b1 Poncirus trifoliata CTV-challenged cDNA library - AGI Citrus trifoliata cDNA clone UCRPT01_01bb08, mRNA sequence.
CD574669.1:324-343
ACTCATGCATGAGCGAAGGGCTGTCATGGG324CATAAGTCATCGTGGCTGGACAAGCGTGCTTGAAGAACGCCGAAAAGCTC
UCRPT01_02cg12_b1 Poncirus trifoliata CTV-challenged cDNA library - AGI Citrus trifoliata cDNA clone UCRPT01_02cg12, mRNA sequence.
CD575068.1:326-345
ACTCATGCATGAGCGAAGGGCTGTCATGGG326CATAAGTCATCGTGGCTGGACAAGCGTGCTTGAAGAACGCCGAAAAGCTC
UCRCS02_05N21_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05N21, mRNA sequence.
CF834637.1:331-350
ACTCATGCATCAGCGAAGGGCTATCATGGG331CATAAGTCATCGTGGCTGGACAAGCGTGCTTGAAAAACTCCAAAAAGCTC
UCRCS02_05N22_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05N22, mRNA sequence.
CF834639.1:331-350
ACTCATGCATCAGCGAAGGGCTATCATGGG331CATAAGTCATCGTGGCTGGACAAGCGTGCTTGAAAAACTCCGAAAAGCTC
UCRCS03_04D18_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa04D18, mRNA sequence.
CF837178.1:321-340
AGTCATGCATGAGCGAAGGGCTGTCATGGG321CATAAGTCATCGTGGCTGGACAAGCGTGCTTGAAGAACTCCGAAAAGCTC
UCRCS03_05C21_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa05C21, mRNA sequence.
CF837761.1:322-341
AGTCATGCATGAGCGAAGGGCTGTCATGGG322CATAAGTCATCGTGGCTGGACAAGCGTGCTTGAAGAACTCCGAAAAGCTC
UCRCS03_05P17_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa05P17, mRNA sequence.
CF838239.1:330-349
AGTCATGCATGAGCGAAGGGCTGTCATGGG330CATAAGTCATCGTGGCTGGACAAGCGTGCTTGAAGAACTCCGAAAAGCTC
UCRCS04_0004D02_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0004D02, mRNA sequence.
CN183568.1:328-347
AGTCATGCATGAGCGAAGGGCTGTCATGGG328CATAAGTCATCGTGGCTGGACAAGCGTGCTTGAAGAACTCCGAAAAGCTC
UCRCS04_0005E13_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005E13, mRNA sequence.
CN184292.1:217-236
AGTCATGCATGAGCGAAGGGCTGTCATGGG217CATAAGTCATCGTGGCTGGACAAGCGTGCTTGAAGAACTCCGAAAAGCTC
UCRPT01_0013L24_f Poncirus trifoliata CTV-challenged cDNA library - AGI2 Citrus trifoliata cDNA clone PT_6Ea0013L24, mRNA sequence.
CV710012.1:302-321
ACTCATGCATGAGCGAAGGGCTGTCATGGG302CATAAGTCATCGTGGCTGGACAAGCGTGCTTGAAGAACGCCGAAAAGCTC
UCRPT01_0014P01_f Poncirus trifoliata CTV-challenged cDNA library - AGI2 Citrus trifoliata cDNA clone PT_6Ea0014P01, mRNA sequence.
CV710805.1:344-363
ACTCATGCATGAGCGAAGGGCTGTCATGGG344CATAAGTCATCGTGGCTGGACAAGCGTGCTTGAAGAACGCCGAAAAGCTC
UCRPT01_0016H22_f Poncirus trifoliata CTV-challenged cDNA library - AGI2 Citrus trifoliata cDNA clone PT_6Ea0016H22, mRNA sequence.
CV711810.1:345-364
ACTCATGCATGAGCGAAGGGCTGTCATGGG345CATAAGTCATCGTGGCTGGACAAGCGTGCTTGAAGAACGCCGAAAAGCTC
UCRCS07_16H06_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-16H06-O12-1-5.b, mRNA sequence.
CX044336.1:328-347
ACTCATGCATCAGCGAAGGGCTATCATGGG328CATAAGTCATCGTGGCTGGACAAGCGTGCTTGAAGAACTCCGAAAAGCTC
UCRCS07_5B02_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-5B02-D3-1-7.b, mRNA sequence.
CX045977.1:380-399
ACTCATGCATCAGCGAAGGGCTATCATGGG380CATAAGTCATCGTGGCTGGACAAGCGTGCTTGAAGAACTCCGAAAAGCTC
UCRCS09_17A05_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-17A05-A10-1-4.g, mRNA sequence.
CX047867.1:358-377
AGTCATGCATGAGCGAAGGGCTGTCATGGG358CATAAGTCATCGTGGCTGGACAAGCGTGCTTGAAGAACTCCGAAAAGCTC
UCRCS09_25E07_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-25E07-I14-1-4.b, mRNA sequence.
CX049092.1:328-347
AGTCATGCATGAGCGAAGGGCTGTCATGGG328CATAAGTCATCGTGGCTGGACAAGCGTGCTTGAAGAACTCCGAAAAGCTC
UCRCS09_28F02_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-28F02-K3-1-4.b, mRNA sequence.
CX049615.1:221-240
ACTCATGCATCAGCGAAGGGCTATCATGGG221CATAAGTCATCGTGGCTGGACAAGCGTGCTTGAAGAACTCCGAAAAGCTC
UCRCS09_33A04_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-33A04-A8-1-5.b, mRNA sequence.
CX050529.1:328-347
AGTCATGCATGAGCGAAGGGCTGTCATGGG328CATAAGTCATCGTGGCTGGACAAGCGTGCTTGAAGAACTCCGAAAAGCTC
UCRCS09_40B04_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-40B04-C7-1-7.b, mRNA sequence.
CX051462.1:382-401
AGTCATGCATGAGCGAAGGGCTGTCATGGG382CATAAGTCATCGTGGCTGGACAAGCGTGCTTGAAGAACTCCGAAAAGCTC
UCRCS08_22A12_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-22A12-A24-1-5.b, mRNA sequence.
CX071499.1:368-387
AGTCATGCATGAGCGAAGGGCTGTCATGGG368CATAAGTCATCGTGGCTGGACAAGCGTGCTTGAAGAACTCCGAAAAGCTC
UCRCS08_24G04_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-24G04-N8-1-5.b, mRNA sequence.
CX071896.1:247-266
AGTCATGCATGAGCGAAGGGCTGTCATGGG247CATAAGTCATCGTGGCTGGACAAGCGTGCTTGAAGAACTCCGAAAAGCTC
UCRCS08_9G04_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-9G04-M7-1-4.g, mRNA sequence.
CX078556.1:343-362
ACTCATGCATCAGCGAAGGGCTATCATGGG343CATAAGTCATCGTGGCTGGACAAGCGTGCTTGAAGAACTCCGAAAAGCTC
UCRPT01_5_013_E03_T7 Poncirus trifoliata CTV-challenged cDNA library - UCRPT01-UCR2 Citrus trifoliata cDNA clone UCRPT01_013_T7_E03, mRNA sequence.
CX544440.1:385-404
ACTCATGCATGAGCGAAGGGCTGTCATGGG385CATAAGTCATCGTGGCTGGACAAGCGTGCTTGAAGAACGCCGAAAAGCTC
UCRPT01_5_029_B11_T7 Poncirus trifoliata CTV-challenged cDNA library - UCRPT01-UCR2 Citrus trifoliata cDNA clone UCRPT01_029_T7_B11, mRNA sequence.
CX546484.1:335-354
ACTCATGCATGAGCGAAGGGCTGTCATGGG335CATAAGTCATCGTGGCTGGACAAGCGTGCTTGAAGAACGCCGAAAAGCTC
UCRCS10_9E03_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-9E03-I5-6.b, mRNA sequence.
CX674919.1:376-395
AGTCATGCATGAGCGAAGGGCTGTCATGGG376CATAAGTCATCGTGGCTGGACAAGCGTGCTTGAAGAACTCCGAAAAGCTC
Citrus unshiu mRNA, clone: PCC1038, 5'-end sequence, expressed in callus.
DC896375.1:294-313
AGTCATGCATGAGCGAAGGGCTGTCATGGG294CATAAGTCATCGTGGCTGGACAAGCGTGCTTGAAGAACTCCGAAAAGCTC
QM0AAC16BB10RM1 CCH3 Citrus clementina genomic clone CCH3024C20, genomic survey sequence.
ET108769.1:110-129
AGTCATGCATGAGCGAAGGGCTGTCATGGG110CATAAGTCATCGTGGCTGGACAAGCGTGCTTGAAGAACTCCGAAAAGCTC
Citrus sinensis genome assembly, chromosome: 5.
OY754322.1:31625486-31625505
AGTCATGCATGAGCGAAGGGCTGTCATGGG31625486CATAAGTCATCGTGGCTGGACAAGCGTGCTTGAAGAACTCCGAAAAGCTC
Aleiodes leptofemur genome assembly, chromosome: 2.
OZ012610.1:10413400-10413419
TTCTCAATAAAGAATCCCTTGCATCTAATT10413400CATAAGTCATCGTGGCTGGAGTGATTAATAAGACATAACACAGATGTAAA
USDA-FP_117000-276 Immature Ovaries from field collected Flying Dragon Trifoliate Orange Citrus trifoliata cDNA clone TFF-15_G10 5', mRNA sequence.
CF419336.1:370-389
GAGCTTTTCGGCGTTCTTCAAGCACGCTTG370TCCAGCCACGATGACTTATGCCCATGACAGCCCTTCGCTCATGCATGAGT
USDA-FP_121000-017 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-33_B02 5', mRNA sequence.
CF505522.1:123-142
GAGCTTTTCGGAGTTCTTCAAGCACGCTTG123TCCAGCCACGATGACTTATGCCCATGATAGCCCTTCGCTGATGCATGAGT
USDA-FP_123000-370 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-61_E03 5', mRNA sequence.
CF507869.1:194-213
GAGCTTTTCGGAGTTCTTCAAGCACGCTTG194TCCAGCCACGATGACTTATGCCCATGACAGCCCTTCGCTCATGCATGACT
USDA-FP_124000-399 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-72_A08 5', mRNA sequence.
CF508896.1:318-337
GAGCTTTTCGGAGTTCTTCAAGCACGCTTG318TCCAGCCACGATGACTTATGCCCATGATAGCCCTTCGCTGATGCATGA
UCRCS02_05N21_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05N21, mRNA sequence.
CF834638.1:176-195
GAGCTTTTCGGAGTTCTTCAAGCACGCTTG176TCCAGCCACGATGACTTATGCCCATGATAGCCCTTCGCTGATGCATGAGT
UCRCS02_05N22_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05N22, mRNA sequence.
CF834640.1:176-195
GAGCTTTTCGGAGTTCTTCAAGCACGCTTG176TCCAGCCACGATGACTTATGCCCATGATAGCCCTTCGCTGATGCATGAGT
UCRCS03_05C21_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa05C21, mRNA sequence.
CF837762.1:682-701
GAGCTTTTCGGAGTTCTTCAAGCACGCTTG682TCCAGCCACGATGACTTATGCCCATGACAGCCCTTCGCTCATGCATGACT
UCRCS03_05P17_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa05P17, mRNA sequence.
CF838240.1:549-568
GAGCTTTTCGGAGTTCTTCAAGCACGCTTG549TCCAGCCACGATGACTTATGCCCATGACAGCCCTTCGCTCATGCATGACT
CGF1004553_B10 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IIF_B10 5', mRNA sequence.
CK935656.1:706-725
GAGCTTTTCGGAGTTCTTCAAGCACGCTTG706TCCAGCCACGATGACTTATGCCCATGACAGCCCTTCGCTCATGCATGACT
CGF1004552_B09 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IF_B09 5', mRNA sequence.
CK935738.1:702-721
GAGCTTTTCGGAGTTCTTCAAGCACGCTTG702TCCAGCCACGATGACTTATGCCCATGACAGCCCTTCGCTCATGCATGACT
UCRPT01_0011C07_r Poncirus trifoliata CTV-challenged cDNA library - AGI2 Citrus trifoliata cDNA clone PT_6Ea0011C07, mRNA sequence.
CV708323.1:686-705
GAGCTTTTCGGCGTTCTTCAAGCACGCTTG686TCCAGCCACGATGACTTATGCCCATGACAGCCCTTCGCTCATGCATGAGT
UCRPT01_0011H16_f Poncirus trifoliata CTV-challenged cDNA library - AGI2 Citrus trifoliata cDNA clone PT_6Ea0011H16, mRNA sequence.
CV708537.1:693-712
GAGCTTTTCGGCGTTCTTCAAGCACGCTTG693TCCAGCCACGATGACTTATGCCCATGACAGCCCTTCGCTCATGCATGAGT
UCRPT01_0013L24_r Poncirus trifoliata CTV-challenged cDNA library - AGI2 Citrus trifoliata cDNA clone PT_6Ea0013L24, mRNA sequence.
CV710013.1:669-688
GAGCTTTTCGGCGTTCTTCAAGCACGCTTG669TCCAGCCACGATGACTTATGCCCATGACAGCCCTTCGCTCATGCATGAGT
UCRPT01_0014P01_r Poncirus trifoliata CTV-challenged cDNA library - AGI2 Citrus trifoliata cDNA clone PT_6Ea0014P01, mRNA sequence.
CV710806.1:669-688
GAGCTTTTCGGCGTTCTTCAAGCACGCTTG669TCCAGCCACGATGACTTATGCCCATGACAGCCCTTCGCTCATGCATGAGT
UCRPT01_0016H22_r Poncirus trifoliata CTV-challenged cDNA library - AGI2 Citrus trifoliata cDNA clone PT_6Ea0016H22, mRNA sequence.
CV711811.1:669-688
GAGCTTTTCGGCGTTCTTCAAGCACGCTTG669TCCAGCCACGATGACTTATGCCCATGACAGCCCTTCGCTCATGCATGAGT
UCRCS04_2_011C07_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T3_C07, mRNA sequence.
CV884896.1:669-688
GAGCTTTTCGGAGTTCTTCAAGCACGCTTG669TCCAGCCACGATGACTTATGCCCATGACAGCCCTTCGCTCATGCATGACT
UCRCS04_2_011D08_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T7_D08, mRNA sequence.
CV884923.1:662-681
GAGCTTTTCGGAGTTCTTCAAGCACGCTTG662TCCAGCCACGATGACTTATGCCCATGACAGCCCTTCGCTCATGCATGACT
UCRCS07_16H06_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-16H06-O12-1-4.g, mRNA sequence.
CX044337.1:682-701
GAGCTTTTCGGAGTTCTTCAAGCACGCTTG682TCCAGCCACGATGACTTATGCCCATGATAGCCCTTCGCTGATGCATGAGT
UCRCS07_5B02_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-5B02-D3-1-6.g, mRNA sequence.
CX045978.1:515-534
GAGCTTTTCGGAGTTCTTCAAGCACGCTTG515TCCAGCCACGATGACTTATGCCCATGATAGCCCTTCGCTGATGCATGAGT
UCRCS09_17A05_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-17A05-A10-1-5.b, mRNA sequence.
CX047868.1:668-687
GAGCTTTTCGGAGTTCTTCAAGCACGCTTG668TCCAGCCACGATGACTTATGCCCATGACAGCCCTTCGCTCATGCATGACT
UCRCS09_25E07_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-25E07-I14-1-5.g, mRNA sequence.
CX049093.1:662-681
GAGCTTTTCGGAGTTCTTCAAGCACGCTTG662TCCAGCCACGATGACTTATGCCCATGACAGCCCTTCGCTCATGCATGACT
Citrus jambhiri RlemTLP mRNA for thaumatin-like protein, complete cds.
AB467316.1:662-681
GAGCTTTTCGGAGTTCTTCAAGCACGCTTG662TCCAGCCACGATGACTTATGCCCATGACAGCCCTTCGCTCATGCATGACT
Aleiodes leptofemur genome assembly, chromosome: 14.
OZ012622.1:10970761-10970780
TTTACATCTGTGTTATGTCTTATTAACCAC10970761TCCAGCCACGATGACTTATGAATTGGATGCAAGGGATTCTTTATTGATAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CATAAGTCATCGTGGCTGGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CATAAGTCATCGTGGCTGGA | format : html | download : | debug :

0.009 | 0.009 | search_start;
1.228 | 1.219 | search_plus_done; http://172.18.8.135:50400/match?q=CATAAGTCATCGTGGCTGGA&k=0&no_gap=0&offset=0&limit=50
2.297 | 1.068 | search_minus_done; http://172.18.8.135:50400/match?q=TCCAGCCACGATGACTTATG&k=0&no_gap=0&offset=0&limit=21
2.312 | 0.015 | cgi_end;

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