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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-11 23:17:49, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sequence 22 from patent US 5811536.
AR042852.1:2990-3009
ATTCGCTCCAGAAAAGTGTGTAAATAAGCA2990CATACAAACGCAAACATCTCTATCTTATCTTTGAGTTTGTGAAGATATAT
Sequence 22 from patent US 6127123.
AR111360.1:2990-3009
ATTCGCTCCAGAAAAGTGTGTAAATAAGCA2990CATACAAACGCAAACATCTCTATCTTATCTTTGAGTTTGTGAAGATATAT
Brassica oleracea var. viridis mRNA, clone: KALE-130I23, 5' end sequence.
DK505480.1:595-614
ATTCGCTCGAGAAAAGTGTGTAAATAAGAA595CATACAAACGCAAACATCTCTATCTTATCTTTGAGTTTGTGAAGATATAC
Brassica oleracea var. viridis mRNA, clone: KALE-130M13, 5' end sequence.
DK505565.1:595-614
ATTCGCTCGAGAAAAGTGTGTAAATAAGAA595CATACAAACGCAAACATCTCTATCTTATCTTTGAGTTTGTGAAGATATAC
Brassica oleracea var. viridis mRNA, clone: KALE-130I23, 3' end sequence.
DK565042.1:154-173
ATTCGCTCGAGAAAAGTGTGTAAATAAGAA154CATACAAACGCAAACATCTCTATCTTATCTTTGAGTTTGTGAAGATATAC
Brassica oleracea var. viridis mRNA, clone: KALE-130M13, 3' end sequence.
DK565126.1:208-227
ATTCGCTCGAGAAAAGTGTGTAAATAAGAA208CATACAAACGCAAACATCTCTATCTTATCTTTGAGTTTGTGAAGATATAC
lkh06d10.b1 B.oleracea002 Brassica oleracea genomic, genomic survey sequence.
BZ074233.1:92-111
ATTCGCTCGAGAAAAGTGTGTAAATAAGAA92CATACAAACGCAAACATCTCTATCTTATCTTTGAGTTTGTGAAGATATAC
Brassica oleracea var. acephala isolate HRI/CGN 6210 cauliflower gene, partial cds.
AF241113.1:352-371
ATTCGCTCCAGAAAAGTGTGTAAATAAGCA352CATACAAACGCAAACATCTCTATCTTATCTTTGAGTTTGTGAAGATATAT
Brassica oleracea var. acephala isolate HRI/CGN 4036 cauliflower gene, partial cds.
AF241114.1:351-370
ATTCGCTCCAGAAAAGTGTGTAAATAAGCA351CATACAAACGCAAACATCTCTATCTTATCTTTGAGTTTGTGAAGATATAT
Brassica oleracea var. acephala isolate HRI/CGN 5688 cauliflower gene, partial sequence.
AF241115.1:352-371
ATTCGCTCCAGAAAAGTGTGTAAATAAGCA352CATACAAACGCAAACATCTCTATCTTATCTTTGAGTTTGTGAAGATATAT
Brassica oleracea var. acephala isolate HRI/CGN 7227 cauliflower gene, partial sequence.
AF241116.1:352-371
ATTCGCTCCAGAAAAGTGTGTAAATAAGCA352CATACAAACGCAAACATCTCTATCTTATCTTTGAGTTTGTGAAGATATAT
Brassica oleracea var. acephala isolate HRI/CGN 7545 cauliflower gene, partial cds.
AF241117.1:352-371
ATTCGCTCCAGAAAAGTGTGTAAATAAGCA352CATACAAACGCAAACATCTCTATCTTATCTTTGAGTTTGTGAAGATATAT
Brassica oleracea var. acephala isolate HRI/CGN 7548 cauliflower gene, partial sequence.
AF241118.1:352-371
ATTCGCTCCAGAAAAGTGTGTAAATAAGCA352CATACAAACGCAAACATCTCTATCTTATCTTTGAGTTTGTGAAGATATAT
Brassica oleracea var. acephala isolate HRI/CGN 7556 cauliflower gene, partial cds.
AF241119.1:347-366
ATTCGCTCGAGAAAAGTGTGTAAATAAGAA347CATACAAACGCAAACATCTCTATCTTATCTTTGAGTTTGTGAAGATATAT
Brassica oleracea var. botrytis isolate HRI/CGN 11799 cauliflower gene, partial sequence.
AF241120.1:354-373
ATTCGCTCCAGAAAAGTGTGTAAATAAGCA354CATACAAACGCAAACATCTCTATCTTATCTTTGAGTTTGTGAAGATATAT
Brassica oleracea var. botrytis isolate HRI/CGN 2481 cauliflower gene, partial sequence.
AF241121.1:352-371
ATTCGCTCCAGAAAAGTGTGTAAATAAGCA352CATACAAACGCAAACATCTCTATCTTATCTTTGAGTTTGTGAAGATATAT
Brassica oleracea var. botrytis isolate HRI/CGN 4495 cauliflower gene, partial sequence.
AF241122.1:90-109
ATTCGCTCCAGAAAAGTGTGTAAATAAGCA90CATACAAACGCAAACATCTCTATCTTATCTTTGAGTTTGTGAAGATATAT
Brassica oleracea var. botrytis isolate HRI/CGN 4814 cauliflower gene, partial sequence.
AF241123.1:352-371
ATTCGCTCCAGAAAAGTGTGTAAATAAGCA352CATACAAACGCAAACATCTCTATCTTATCTTTGAGTTTGTGAAGATATAT
Brassica oleracea var. botrytis isolate HRI/CGN 6249 cauliflower gene, partial sequence.
AF241124.1:352-371
ATTCGCTCCAGAAAAGTGTGTAAATAAGCA352CATACAAACGCAAACATCTCTATCTTATCTTTGAGTTTGTGAAGATATAT
Brassica oleracea var. botrytis cauliflower gene, partial sequence.
AF241125.1:352-371
ATTCGCTCCAGAAAAGTGTGTAAATAAGCA352CATACAAACGCAAACATCTCTATCTTATCTTTGAGTTTGTGAAGATATAT
Brassica oleracea var. botrytis isolate HRI/CGN 6792 cauliflower gene, partial sequence.
AF241126.1:350-369
ATTCGCTCCAGAAAAGTGTGTAAATAAGCA350CATACAAACGCAAACATCTCTATCTTATCTTTGAGTTTGTGAAGATATAT
Brassica oleracea var. botrytis isolate HRI/CGN 7369 cauliflower gene, partial sequence.
AF241127.1:352-371
ATTCGCTCCAGAAAAGTGTGTAAATAAGCA352CATACAAACGCAAACATCTCTATCTTATCTTTGAGTTTGTGAAGATATAT
Brassica oleracea var. botrytis isolate HRI/CGN 7452 cauliflower gene, partial sequence.
AF241128.1:352-371
ATTCGCTCCAGAAAAGTGTGTAAATAAGCA352CATACAAACGCAAACATCTCTATCTTATCTTTGAGTTTGTGAAGATATAT
Brassica oleracea var. botrytis isolate HRI/CGN 8567 cauliflower gene, partial sequence.
AF241129.1:352-371
ATTCGCTCCAGAAAAGTGTGTAAATAAGCA352CATACAAACGCAAACATCTCTATCTTATCTTTGAGTTTGTGAAGATATAT
Brassica oleracea var. italica isolate HRI/CGN 10674 cauliflower gene, partial sequence.
AF241130.1:352-371
ATTCGCTCCAGAAAAGTGTGTAAATAAGCA352CATACAAACGCAAACATCTCTATCTTATCTTTGAGTTTGTGAAGATATAT
Brassica oleracea var. italica isolate HRI/CGN 3553 cauliflower gene, partial sequence.
AF241131.1:352-371
ATTCGCTCCAGAAAAGTGTGTAAATAAGCA352CATACAAACGCAAACATCTCTATCTTATCTTTGAGTTTGTGAAGATATAT
Brassica oleracea var. italica isolate HRI/CGN 3569 cauliflower gene, partial sequence.
AF241132.1:352-371
ATTCGCTCCAGAAAAGTGTGTAAATAAGCA352CATACAAACGCAAACATCTCTATCTTATCTTTGAGTTTGTGAAGATATAT
Brassica oleracea var. italica isolate HRI/CGN 3575 cauliflower gene, partial sequence.
AF241133.1:352-371
ATTCGCTCCAGAAAAGTGTGTAAATAAGCA352CATACAAACGCAAACATCTCTATCTTATCTTTGAGTTTGTGAAGATATAT
Brassica oleracea var. italica isolate HRI/CGN 4707 cauliflower gene, partial sequence.
AF241134.1:352-371
ATTCGCTCCAGAAAAGTGTGTAAATAAGCA352CATACAAACGCAAACATCTCTATCTTATCTTTGAGTTTGTGAAGATATAT
Brassica oleracea var. italica isolate HRI/CGN 4707 cauliflower gene, partial sequence.
AF241135.1:149-168
ATTCGCTCCAGAAAAGTGTGTAAATAAGCA149CATACAAACGCAAACATCTCTATCTTATCTTTGAGTTTGTGAAGATATAT
Brassica oleracea var. italica isolate HRI/CGN 7519 cauliflower gene, partial cds.
AF241136.1:346-365
ATTCGCTCGAGAAAAGTGTGTAAATAAGAA346CATACAAACGCAAACATCTCTATCTTATCTTTGAGTTTGTGAAGATATAC
Brassica oleracea var. italica isolate HRI/CGN 8196 cauliflower gene, partial sequence.
AF241137.1:352-371
ATTCGCTCCAGAAAAGTGTGTAAATAAGCA352CATACAAACGCAAACATCTCTATCTTATCTTTGAGTTTGTGAAGATATAT
Brassica oleracea var. italica isolate HRI/CGN 8680 cauliflower gene, partial sequence.
AF241138.1:352-371
ATTCGCTCCAGAAAAGTGTGTAAATAAGCA352CATACAAACGCAAACATCTCTATCTTATCTTTGAGTTTGTGAAGATATAT
Brassica oleracea var. oleracea isolate HRI/CGN 7149 cauliflower gene, partial sequence.
AF241139.1:351-370
ATTCGCTCCAGAAAAGTGTGTAAATAAGCA351CATACAAACGCAAACATCTCTATCTTATCTTTGAGTTTGTGAAGATATAT
Brassica oleracea var. oleracea isolate HRI/CGN 11125 cauliflower gene, partial cds.
AF241140.1:352-371
ATTCGCTCCAGAAAAGTGTGTAAATAAGCA352CATACAAACGCAAACATCTCTATCTTATCTTTGAGTTTGTGAAGATATAT
Brassica oleracea var. oleracea isolate HRI/CGN 14079 cauliflower gene, partial cds.
AF241141.1:352-371
ATTCGCTCCAGAAAAGTGTGTAAATAAGCA352CATACAAACGCAAACATCTCTATCTTATCTTTGAGTTTGTGAAGATATAT
Brassica oleracea var. oleracea isolate HRI/CGN 7230 cauliflower gene, partial cds.
AF241142.1:352-371
ATTCGCTCCAGAAAAGTGTGTAAATAAGCA352CATACAAACGCAAACATCTCTATCTTATCTTTGAGTTTGTGAAGATATAT
Brassica oleracea var. oleracea isolate HRI/CGN 7343 cauliflower gene, partial cds.
AF241143.1:346-365
ATTCGCTCGAGAAAAGTGTGTAAATAAGAA346CATACAAACGCAAACATCTCTATCTTATCTTTGAGTTTGTGAAGATATAC
Brassica oleracea var. oleracea isolate HRI/CGN 7795 cauliflower gene, partial cds.
AF241144.1:346-365
ATTCGCTCGAGAAAAGTGTGTAAATAAGAA346CATACAAACGCAAACATCTCTATCTTATCTTTGAGTTTGTGAAGATATAC
Brassica oleracea var. oleracea isolate HRI/CGN 7796 cauliflower gene, partial cds.
AF241145.1:352-371
ATTCGCTCCAGAAAAGTGTGTAAATAAGCA352CATACAAACGCAAACATCTCTATCTTATCTTTGAGTTTGTGAAGATATAT
Brassica oleracea var. oleracea isolate HRI/CGN 7797 cauliflower gene, partial cds.
AF241146.1:352-371
ATTCGCTCCAGAAAAGTGTGTAAATAAGCA352CATACAAACGCAAACATCTCTATCTTATCTTTGAGTTTGTGAAGATATAT
Brassica oleracea var. oleracea isolate HRI/CGN 8694 cauliflower gene, partial sequence.
AF241147.1:352-371
ATTCGCTCCAGAAAAGTGTGTAAATAAGCA352CATACAAACGCAAACATCTCTATCTTATCTTTGAGTTTGTGAAGATATAT
Brassica oleracea var. oleracea isolate HRI/CGN 8705 cauliflower gene, partial cds.
AF241148.1:351-370
ATTCGCTCCAGAAAAGTGTGTAAATAAGCA351CATACAAACGCAAACATCTCTATCTTATCTTTGAGTTTGTGAAGATATAT
Brassica oleracea var. oleracea isolate HRI/CGN 8707 cauliflower gene, partial cds.
AF241149.1:352-371
ATTCGCTCCAGAAAAGTGTGTAAATAAGCA352CATACAAACGCAAACATCTCTATCTTATCTTTGAGTTTGTGAAGATATAT
Brassica incana cauliflower gene, partial cds.
AF241150.1:352-371
ATTCGCTCCAGAAAAGTGTGTAAATAAGCA352CATACAAACGCAAACATCTCTATCTTATCTTTGAGTTTGTGAAGATATAT
Brassica oleracea var. botrytis DNA binding protein variant c (CAL) mRNA, complete cds, alternatively spliced.
AY514054.1:451-470
ATTCCCTCCAGAAAAGTGTGTAAATAAGCA451CATACAAACGCAAACATCTCTATCTTATCTTTGAGTTTGTGAAGATATAT
Brassica oleracea var. botrytis DNA binding protein variant d (CAL) mRNA, complete cds, alternatively spliced.
AY514055.1:451-470
ATTCGCTCCAGAAAAGTGTGTAAATAAGCA451CATACAAACGCAAACATCTCTATCTTATCTTTGAGTTTGTGAAGATATAT
Brassica napus genome assembly, chromosome: C03.
HG994367.1:55617838-55617857
ATTCGCTCGAGAAAAGTGTGTAAATAAGAA55617838CATACAAACGCAAACATCTCTATCTTATCTTTGAGTTTGTGAAGATATAC
Brassica oleracea HDEM genome, scaffold: C3.
LR031872.1:56151547-56151566
ATTCGCTCCAGAAAAGTGTGTAAATAAGCA56151547CATACAAACGCAAACATCTCTATCTTATCTTTGAGTTTGTGAAGATATAT
Grapholita molesta isolate lab01 chromosome gm04.
CP053123.1:17637-17656
TTTCGTCAAATGTTTTGCAGACACTAATGC17637CATACAAACGCAAACATCTCGCTTATCAATCGTTAAGAACAAAACTATAG
Cydalima perspectalis genome assembly, chromosome: 12.
OX596211.1:6036090-6036109
TGGGCGTGATGTTATGTATGTATGTATTCA6036090CATACAAACGCAAACATCTCTTCACGTTAAGATTATATAAAAATCTATGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CATACAAACGCAAACATCTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CATACAAACGCAAACATCTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.359 | 0.350 | search_plus_done; http://172.18.8.135:50400/match?q=CATACAAACGCAAACATCTC&k=0&no_gap=0&offset=0&limit=50
0.497 | 0.138 | search_minus_done; http://172.18.8.135:50400/match?q=GAGATGTTTGCGTTTGTATG&k=0&no_gap=0&offset=0&limit=0
0.497 | 0.000 | cgi_end;

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