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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2026-03-05 04:52:40, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Lotus japonicus genomic DNA, chromosome 1, clone: LjT41E18, TM0207.
AP009658.1:41014-41033
AAAAATATTAGGCAAAATTAAATTATAACG41014CATACCATACATTTCCTGCGATGATTTACGTGTCTCTGATAGAAAGACCA
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:73376306-73376325
AAAAATATTAGGCAAAATTAAATTATAACG73376306CATACCATACATTTCCTGCGATGATTTACGTGTCTCTGATAGAAAGACCA
Rubus caesius genome assembly, chromosome: 10.
OZ174139.1:32641530-32641549
TATTCACATTTTCATTTGAAAAAAAGTGAA32641530CATACCATACATTTCCTGCGTTTATAAACACAAAAAAAAAAATAGAGAAC
Polytrichastrum sexangulare genome assembly, chromosome: 14.
OZ222688.1:11095704-11095723
GCTATGAATATAGGAGAGATTCTCCGCCGA11095704CATACCATACATTTCCTGCGTAATTTTGGGTGCATTAAGCTTAAATGTAA
Lotus pedunculatus genome assembly, chromosome: 1.
OZ243168.1:82424930-82424949
GAAAAGGTTAGGCAGAATTAAATTATAACG82424930CATACCATACATTTCCTGCGATGATTTACGCGTCTCCGATAAGAAGACCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CATACCATACATTTCCTGCG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CATACCATACATTTCCTGCG | format : html | download : | debug :

0.009 | 0.009 | search_start;
1.936 | 1.928 | search_plus_done; http://172.18.8.135:50900/match?q=CATACCATACATTTCCTGCG&k=0&no_gap=0&offset=0&limit=50
2.973 | 1.036 | search_minus_done; http://172.18.8.135:50900/match?q=CGCAGGAAATGTATGGTATG&k=0&no_gap=0&offset=0&limit=45
2.973 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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