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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-03-04 05:23:42, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Annulohypoxylon sp. FPYF3050 chromosome 8.
CP157661.1:2026392-2026411
CCGTGAATATCGTTGATGGAGACATAGGTT2026392CATACCTCCCCGTCCATCTATCGGATCTTCCTCCGGTCGTCCCCCTTGAC
Digitaria exilis genome assembly, chromosome: 5A.
LR994612.1:37312677-37312696
TTCTGCAGCTGTTGTCCCACAGATGAGCCT37312677CATACCTCCCCGTCCATCTATGCCTAAAATAAATCAAAAGTAGAACCTTT
Phragmites australis genome assembly, chromosome: 2.
OY282613.1:47752466-47752485
TTCTGCAGCTGTTGTCCCACAGATGAGCCT47752466CATACCTCCCCGTCCATCTATGCCTAAATCCAATAAAAAGCAGAAGCTTT
Citrus reshni genome assembly, chromosome: 1.
OZ125143.2:34596805-34596824
TTCTGCAGCTGTTATCCCACAAGTGAGCTT34596805CATACCTCCCCGTCCATCTATGTCTTCATCATCAAAGCAGCCAAAAAAAT
Citrus micrantha genome assembly, chromosome: 1.
OZ125597.1:29416510-29416529
TTCTGCAGCTGTTATCCCACAAGTGAGCTT29416510CATACCTCCCCGTCCATCTATGTCTTCATCATCAAAGCAGCCAAAAAAAT
Digitaria sanguinalis genome assembly, chromosome: 8.
OZ156435.1:52395113-52395132
TCTTGCAGCTGTTGTCCCACAGGTGCGCCT52395113CATACCTCCCCGTCCATCTATGCCTGCTTAATTTTTCCCACTCGTCGGAT
Musa acuminata var. zebrina genome assembly, chromosome: 8.
OZ184682.1:9939438-9939457
TCCAGCAGTGCTTGTCCCAGAGGTGAGCTT9939438CATACCTCCCCGTCCATCTATGCCTGGATGACGACATGCGTCGTCGTCAA
Juncus squarrosus genome assembly, chromosome: 4.
OZ243989.1:6128342-6128361
TTTTGCAACTGTTATCCCATAGATGTGCCT6128342CATACCTCCCCGTCCATCTATGCCTGGTTTAAAAAGAAAAGAAAAAAGAG
Juncus squarrosus genome assembly, chromosome: 4.
OZ244092.1:6122385-6122404
TTTTGCAACTGTTATCCCATAGATGTGCCT6122385CATACCTCCCCGTCCATCTATGCCTGGTTTAAAAAGAAAAGAAAAAAGAG
IC0AAA22CC06RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY267839.1:751-770
CACCTCTATTTACCGAGGGGTCACTAGACA751TAGATGGACGGGGAGGTATGAAGCTCACTTGTGGGATAACAGCTGCAGAA
IC0AAA39DE01RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY275609.1:730-749
CACCTCTATTTACCGAGGGGTCACTAGACA730TAGATGGACGGGGAGGTATGAAGCTCACTTGTGGGATAACAGCTGCAGAA
IC0AAA41BF12RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY276534.1:416-435
CACCTCTATTTACCGAGGGGTCACTAGACA416TAGATGGACGGGGAGGTATGAAGCTCACTTGTGGGATAACAGCTGCAGAA
IC0AAA78BH08RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY291553.1:733-752
CACCTCTATTTACCGAGGGGTCACTAGACA733TAGATGGACGGGGAGGTATGAAGCTCACTTGTGGGATAACAGCTGCAGAA
CS00-C3-700-028-H07-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
EY694746.1:607-626
CACCTCTATTTACCGAGGGGTCACTAGACA607TAGATGGACGGGGAGGTATGAAGCTCACTTGTGGGATAACAGCTGCAGAA
CR05-C3-701-049-F09-CT.F Mandarin fruit, development stadium (2 of 3) Citrus reticulata cDNA, mRNA sequence.
EY797186.1:399-418
CACCTCTATTTACCGAGGGGTCACTAGACA399TAGATGGACGGGGAGGTATGAAGCTCACTTGTGGGATAACAGCTGCAGAA
IC0AAA78BH08RM1 IVIA1 Citrus clementina cDNA clone IC0AAA78BH08, mRNA sequence.
FC883898.1:733-752
CACCTCTATTTACCGAGGGGTCACTAGACA733TAGATGGACGGGGAGGTATGAAGCTCACTTGTGGGATAACAGCTGCAGAA
IC0AAA41BF12RM1 IVIA1 Citrus clementina cDNA clone IC0AAA41BF12, mRNA sequence.
FC887503.1:416-435
CACCTCTATTTACCGAGGGGTCACTAGACA416TAGATGGACGGGGAGGTATGAAGCTCACTTGTGGGATAACAGCTGCAGAA
IC0AAA39DE01RM1 IVIA1 Citrus clementina cDNA clone IC0AAA39DE01, mRNA sequence.
FC907326.1:730-749
CACCTCTATTTACCGAGGGGTCACTAGACA730TAGATGGACGGGGAGGTATGAAGCTCACTTGTGGGATAACAGCTGCAGAA
IC0AAA22CC06RM1 IVIA1 Citrus clementina cDNA clone IC0AAA22CC06, mRNA sequence.
FC910645.1:751-770
CACCTCTATTTACCGAGGGGTCACTAGACA751TAGATGGACGGGGAGGTATGAAGCTCACTTGTGGGATAACAGCTGCAGAA
Musa troglodytarum cultivar karat chromosome 3.
CP097505.1:2726766-2726785
CTGACGACGACGCATGTCGTCATCCAGGCA2726766TAGATGGACGGGGAGGTATGAAGCTCACCTCTGGGACAAGCACTGCTGGA
Musa acuminata subsp. malaccensis strain Doubled-haploid Pahang (DH-Pahang) genome assembly, chromosome: A03.
HG996468.1:2337249-2337268
TTGACGACGACGCATGTCGTCATCCAGGCA2337249TAGATGGACGGGGAGGTATGAAGCTCACCTCTGGGACAAGCACTGCTGGA
Digitaria exilis genome assembly, chromosome: 2A.
LR994606.1:1737486-1737505
ATCCGACGAGTGGGTAAAATTAAGCAGGCA1737486TAGATGGACGGGGAGGTATGAGGCACACCTGTGGGACAACAGCTGCAAGA
Digitaria exilis genome assembly, chromosome: 2B.
LR994607.1:1680840-1680859
ATCCGACGAGTGGGTAAAATTAAGCAGGCA1680840TAGATGGACGGGGAGGTATGAGGCACACCTGTGGGACAACAGCTGCAAGA
Citrus sinensis genome assembly, chromosome: 7.
OY754324.1:1790803-1790822
ATTTTTTTGGCTGCTTTGATGATGAAGACA1790803TAGATGGACGGGGAGGTATGAAGCTCACTTGTGGGATAACAGCTGCAGAA
Adonis annua genome assembly, chromosome: 8.
OZ123183.1:601571966-601571985
ATAAAACACTAATTTCGGGCGTTACAGACA601571966TAGATGGACGGGGAGGTATGAAGCACACTTGTGGGATAACAGTTGTAGAA
Digitaria sanguinalis genome assembly, chromosome: 2.
OZ156429.1:2519390-2519409
ATCCGACGAGTGGGAAAAATTAAGCAGGCA2519390TAGATGGACGGGGAGGTATGAGGCACACCTGTGGGACAACAGCTGCAAGA
Musa banksii genome assembly, chromosome: 3.
OZ184654.1:2304844-2304863
TTGACGACGACGCATGTCGTCATCCAGGCA2304844TAGATGGACGGGGAGGTATGAAGCTCACCTCTGGGACAAGCACTGCTGGA
Musa textilis genome assembly, chromosome: 3.
OZ184666.1:2393474-2393493
CTGACGACGACGCATGTCGTCATCCAGGCA2393474TAGATGGACGGGGAGGTATGAAGCTCACCTCTGGGACAAGCACTGCTGGA
Rhinanthus minor genome assembly, chromosome: 9.
OZ185424.1:24942183-24942202
ATTTTATTTTTTCTATGAATTGTGCAGGCA24942183TAGATGGACGGGGAGGTATGAGGCCCATCTGTGGGATAATACTTGCAGAA
Musa hybrid cultivar genome assembly, chromosome: 3.
OZ185482.1:2371517-2371536
TTGACGACGACGCATGTCGTCATCCAGGCA2371517TAGATGGACGGGGAGGTATGAAGCTCACCTCTGGGACAAGCACTGCTGGA
Musa hybrid cultivar genome assembly, chromosome: 3.
OZ185494.1:2363527-2363546
TTGACGACGACGCATGTCGTCATCCAGGCA2363527TAGATGGACGGGGAGGTATGAAGCTCACCTCTGGGACAAGCACTGCTGGA
Musa acuminata subsp. burmannicoides genome assembly, chromosome: 3.
OZ193588.1:2359439-2359458
TTGACGACGACGCATGTCGTCATCCAGGCA2359439TAGATGGACGGGGAGGTATGAAGCTCACCTCTGGGACAAGCACTGCTGGA
Honckenya peploides genome assembly, chromosome: 3.
OZ246755.1:118003626-118003645
TATGTGGGTACCTAAATGTTGGACCAGGCA118003626TAGATGGACGGGGAGGTATGAGGCTCATCTTTGGGATAACAGTTGTAGAA
Pseudodesulfovibrio thermohalotolerans strain MCM B-1480 chromosome, complete genome.
CP120635.1:1820123-1820142
AAATTCTCGTCGGCCATGGGGAAGCGGACA1820123TAGATGGACGGGGAGGTATGGTCCTCGTATTCCACTTCGGCCTCGGCCAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CATACCTCCCCGTCCATCTA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CATACCTCCCCGTCCATCTA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.399 | 0.390 | search_plus_done; http://172.18.8.135:50900/match?q=CATACCTCCCCGTCCATCTA&k=0&no_gap=0&offset=0&limit=50
1.615 | 1.216 | search_minus_done; http://172.18.8.135:50900/match?q=TAGATGGACGGGGAGGTATG&k=0&no_gap=0&offset=0&limit=41
1.631 | 0.017 | cgi_end;

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