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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:39:54, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

RTDR1_16_B06.g1_A015 Loblolly pine roots recovering from drought DR1 Pinus taeda cDNA clone RTDR1_16_B06_A015 5', mRNA sequence.
CF386767.1:118-137
GAAAGCCAAACATTGTATTGAAAAACTACT118CATATCCAGTTCTTTAGACGCTAGCAGATAGTAGCAGATAGTAGGTGTTG
RTPHOS1_30_H03.g1_A029 Roots minus phosphorous Pinus taeda cDNA clone RTPHOS1_30_H03_A029 5', mRNA sequence.
DR169222.1:101-120
GAAAGCCAAACATTGTATTGAAAAACTACT101CATATCCAGTTCTTTAGACGCTAGCAGATAGTAGCAGAGAGTAGGTGTTG
EST958377 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA clone RPIIO11 5' end, mRNA sequence.
DN462578.1:888-907
CAACACCTACTATCTGCTACTATCTGCTAG888CGTCTAAAGAACTGGATATGAGTAGTTTTTCAATACAATGTTTGGCTTTC
RTMG1_9_C08.b1_A029 Roots minus magnesium Pinus taeda cDNA clone RTMG1_9_C08_A029 3', mRNA sequence.
DR117774.1:407-426
CAACACCTACTATCTGCTACTATCTGCTAG407CGTCTAAAGAACTGGATATGAGTAGTTTTTCAATACAATGTTTGGCTTTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CATATCCAGTTCTTTAGACG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CATATCCAGTTCTTTAGACG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.409 | 0.400 | search_plus_done; http://172.18.8.135:50400/match?q=CATATCCAGTTCTTTAGACG&k=0&no_gap=0&offset=0&limit=50
0.571 | 0.162 | search_minus_done; http://172.18.8.135:50400/match?q=CGTCTAAAGAACTGGATATG&k=0&no_gap=0&offset=0&limit=48
0.573 | 0.002 | cgi_end;

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