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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-03-25 04:44:58, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Fissipunctia ypsillon genome assembly, chromosome: 7.
OX387650.1:25326400-25326419
AATAAAAGTAGGCTAAGGTACTCTTTATAA25326400CATCAGCTAGTGAAAGCCCCGTCAAAATCGGTCCAGCCGTTTTTCGGAGA
Diaphora mendica genome assembly, chromosome: 12.
OX421322.1:5867437-5867456
TAAAAAAGTAGCTTAAGGTTCTCCTTATTG5867437CATCAGCTAGTGAAAGCCCCGTCAAAATCGGTCCAGCTGTTCCAGAGATT
Phengaris arion genome assembly, chromosome: 11.
OY751442.1:20703813-20703832
GATAAAAGTAGCCCCTGTTTCTCCTTATAA20703813CATCAGCTAGTGAAAGCCCCGTGGAAATCGGTCCAGGCAAATCAGAGATT
Vigna angularis mRNA, clone: VES10D09.
HX945937.1:580-599
ATGAGGCGAAGGCCGCAAGCATGGTTGGAG580GGGGCTTTCACTAGCTGATGGAGTTTTTCATGTTTCAGTTTTGTCCCCTG
Vigna angularis mRNA, clone: VES17A06.
HX948501.1:650-669
ATGAGGCGAAGGCCGCAAGCATGGTTGGAG650GGGGCTTTCACTAGCTGATGGAGTTTTTCATGTTTCAGTTTTGTCCCCTG
Vigna angularis var. angularis DNA, chromosome 11, almost complete sequence, cultivar: Shumari.
AP015044.1:17876535-17876554
ATGAGGCGAAGGCCGCAAGCATGGTTGGAG17876535GGGGCTTTCACTAGCTGATGGAGTTTTTCATGTTTCAGTTTTGTCCCCTG
Pheosia tremula genome assembly, chromosome: 2.
HG995398.1:6195571-6195590
AATCTCTGAAATGGCTGGACCGATTTTGAC6195571GGGGCTTTCACTAGCTGATGTAACAAGGCGTATCCTAGGCTACTTTTATT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CATCAGCTAGTGAAAGCCCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CATCAGCTAGTGAAAGCCCC | format : html | download : | debug :

0.008 | 0.008 | search_start;
0.379 | 0.371 | search_plus_done; http://172.18.8.135:50400/match?q=CATCAGCTAGTGAAAGCCCC&k=0&no_gap=0&offset=0&limit=50
0.640 | 0.261 | search_minus_done; http://172.18.8.135:50400/match?q=GGGGCTTTCACTAGCTGATG&k=0&no_gap=0&offset=0&limit=47
0.643 | 0.003 | cgi_end;

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