GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 19:02:31, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Elaeis guineensis EST, clone (6lib)_isotig20667.
LM627660.1:801-822
TACCCGGACCTTCACCCCCTCCGGGATGTC801CATCATCTCCGTTGCCAGTATTGTCTTCATCTTCTCCGTCTCCGCCGCCGCC
OPYF00687 Elaeis guineensis young flower 4-6 cm Elaeis guineensis cDNA clone 180-F5-T3.seq, mRNA sequence.
EL681599.1:8-29
TGAAGAC8AATACTGGCAACGGAGATGATGGACATCCCGGAGGGGGTGAAAGTCCGGGTG
OPYF01567 Elaeis guineensis young flower 4-6 cm Elaeis guineensis cDNA clone PLATE-205-H6-T3.seq, mRNA sequence.
EL682454.1:10-31
ATTGAAGAC10AATACTGGCAACGGAGATGATGGACATCCCGGAGGGGGTGAAAGTCCGGGTG
pOP-EO02861 EO (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EO02861 similar to Structural constituent of ribosome, mRNA sequence.
ES324084.1:133-154
GGCGGCGGCGGAGACGGAGAAGATGAAGAC133AATACTGGCAACGGAGATGATGGACATCCCGGAGGGGGTGAAAGTCCGGGTG
pOP-EO02861_EST_C_1_pSK_SK EO (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EO02861 5', mRNA sequence.
EY410518.1:132-153
GGCGGCGGCGGAGACGGAGAAGATGAAGAC132AATACTGGCAACGGAGATGATGGACATCCCGGAGGGGGTGAAAGTCCGGGTG
Leptura quadrifasciata genome assembly, chromosome: 3.
OY776675.1:113187661-113187682
GTGGACATTGAACAAAAAGATGGAGAATAA113187661AATACTGGCAACGGAGATGATGTATTGGAGACGATGTTGTAAAAAGACATTA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CATCATCTCCGTTGCCAGTATT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CATCATCTCCGTTGCCAGTATT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.196 | 0.188 | search_plus_done; http://172.18.8.135:50400/match?q=CATCATCTCCGTTGCCAGTATT&k=0&no_gap=0&offset=0&limit=50
0.418 | 0.221 | search_minus_done; http://172.18.8.135:50400/match?q=AATACTGGCAACGGAGATGATG&k=0&no_gap=0&offset=0&limit=49
0.421 | 0.003 | cgi_end;

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