GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-19 05:41:49, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Pipistrellus pygmaeus genome assembly, chromosome: 14.
OX465316.1:4459364-4459383
TCCTCCCCCCCGCAGCCATGGCCGAGCTCA4459364CATCCGGGTCTCTGACCCTCTGAAAGGCTCCTGCCGCCCTGTGGGTGCAA
Vespertilio murinus genome assembly, chromosome: 11.
OZ004715.1:4495625-4495644
GGGCCCCACCCACAGCCATGGCTGAGCTCA4495625CATCCGGGTCTCTGACCCTCCAAAAGGCTCCCGCCGCCCTGCGGGTGTAA
Lotus japonicus genomic DNA, chromosome 5, clone: LjB21O22, BM1451.
AP008090.2:91378-91397
ATTTCTGACTCATGAAGTCATGATCCCTTG91378CATCCGGGTCTCTGACCCTCCAAATTATAAAATATATATATATATATATA
Lotus japonicus B-129 DNA, chromosome 5, complete sequence.
AP022633.1:64640563-64640582
ATTTCTGACTCATGAAGTCATGATCCCTTG64640563CATCCGGGTCTCTGACCCTCCAAATTATAAAATATATATATATATATATA
Chionographis japonica genome assembly, chromosome: 1.
OX393549.1:61891454-61891473
TCGGGTTGGAGATTACTTCTTTGAGCTCAC61891454CATCCGGGTCTCTGACCCTCTTCTCCGGGCTCCTCCTCTGCTTCGGTTCA
Arvicola amphibius genome assembly, chromosome: 8.
LR862388.1:108143605-108143624
ACCAAGTGTAACGTTTTATTGCCTTTTCCT108143605GAGGGTCAGAGACCCGGATGAGAATCCAACTCTTTACTGTCATAGGGGAA
Chionomys nivalis genome assembly, chromosome: 2.
OX465450.1:112963874-112963893
TATTGATCTTGAACCTTGATGCCTTTGCCT112963874GAGGGTCAGAGACCCGGATGAGAATCCAACTCTTTACTGTCACAAGGGAA
Pipistrellus pipistrellus genome assembly, chromosome: 14.
LR862370.1:49465777-49465796
TTGCACCCACAGGGCGGCAGGAGCCTTTCA49465777GAGGGTCAGAGACCCGGATGTGAGCTCGGCCATGGTTGCGGGGGTGAGGG
Lotus japonicus genomic DNA, chromosome 5, clone: LjT31L14, TM0366.
AP006667.1:89570-89589
TATATATATATATATATATTTTATAATTTG89570GAGGGTCAGAGACCCGGATGCAAGGGATCATGACTTCATGAGTCAGAAAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CATCCGGGTCTCTGACCCTC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CATCCGGGTCTCTGACCCTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.099 | 0.091 | search_plus_done; http://172.18.8.135:50400/match?q=CATCCGGGTCTCTGACCCTC&k=0&no_gap=0&offset=0&limit=50
0.121 | 0.022 | search_minus_done; http://172.18.8.135:50400/match?q=GAGGGTCAGAGACCCGGATG&k=0&no_gap=0&offset=0&limit=45
0.124 | 0.003 | cgi_end;

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