GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 11:58:43, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Dianthus caryophyllus mRNA, clone: CES08J11, 5' end sequence.
FY385347.1:472-491
GAAATAGACAACATTTATATGTAAATGATC472CGGAGCTAGTGAGGGAGATGAGCCAAAACATGACATTAGGTTTGGGAAAG
Lathyrus sativus genome assembly, chromosome: 5.
OZ012739.1:228468894-228468913
ATGTGTGTGTTGTTATGGAGGCGCGGTGGC228468894CGGAGCTAGTGAGGGAGATGACCGGACTTTTTTTCCGGCCGGTGAGAAGT
Lathyrus sativus genome assembly, chromosome: 5.
OZ012739.1:228485316-228485335
TTTTGTGTGTTGTTATGGAGGCGCGGTGGC228485316CGGAGCTAGTGAGGGAGATGACTGGACTTTTTTTCCGGCCGGTGAGAAGT
Lathyrus sativus genome assembly, chromosome: 5.
OZ012739.1:620264208-620264227
TTGTGTGTGTTGTTATGGAGGCGCGGTGGC620264208CGGAGCTAGTGAGGGAGATGACCAGACTTTTTTTCCGGCCGGTGAGAAGT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CATCTCCCTCACTAGCTCCG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CATCTCCCTCACTAGCTCCG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.106 | 0.098 | search_plus_done; http://172.18.8.135:50400/match?q=CATCTCCCTCACTAGCTCCG&k=0&no_gap=0&offset=0&limit=50
0.215 | 0.109 | search_minus_done; http://172.18.8.135:50400/match?q=CGGAGCTAGTGAGGGAGATG&k=0&no_gap=0&offset=0&limit=50
0.218 | 0.003 | cgi_end;

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