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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 14:01:40, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Trifolium repens isolate ACLI19 chromosome 07_Pall.
CP125849.1:8213179-8213199
ATCTCTTTTGGGTTCAAGATAACAAGACAA8213179CATCTCTGCATTGAGGTAGCATACTGCAAACAAATAATTAATATTATTGTT
Medicago arabica genome assembly, chromosome: 6.
OX326969.1:26437687-26437707
ATCTCTTTTGGATTCAAGATAACAAGACAA26437687CATCTCTGCATTGAGGTAGCATACTGCAAAACAAAAACAAATGAATATTAT
Trifolium dubium genome assembly, chromosome: 4.
OX638065.1:12834189-12834209
ATCTCTTTTGGGTTCAAGATAACAAGACAA12834189CATCTCTGCATTGAGGTAGCATACTGCAAAACAAATAATGAAATATCATAG
Trifolium dubium genome assembly, chromosome: 11.
OX638072.1:9328969-9328989
ATCTCTTTTGGGTTCAAGATAACAAGACAA9328969CATCTCTGCATTGAGGTAGCATACTGCAAAACAAATAATGAAGTATCATAG
Trifolium fragiferum genome assembly, chromosome: 5.
OX940793.1:9497380-9497400
ATCTCTTTTGGGTTCAAGATAACAAGACAA9497380CATCTCTGCATTGAGGTAGCATACTGCAAATAAATCAATTAATATCATCGT
Lathyrus aphaca genome assembly, chromosome: 7.
OZ014525.1:346903667-346903687
ATCTCTTTAGGATTCAAAATAACAAGACAG346903667CATCTCTGCATTGAGGTAGCATACTGCAAAACATATAATAAAATCAATATT
Vector pBAD-4DO1, complete sequence.
MT270495.1:7755-7775
AGACGATGGTTACCTTCTTGTTGTTGAGTA7755TGCTACCTCAATGCAGAGATGTTGTCTTGTTGTCTTGAACCCAAAAGAGAT
Vector pBAD-CL1, complete sequence.
MT270496.1:7755-7775
AGACGATGGTTACCTTCTTGTTGTTGAGTA7755TGCTACCTCAATGCAGAGATGTTGTCTTGTTGTCTTGAACCCAAAAGAGAT
Vector pTU2-b_TrxD27-TrxCCD7-MBPCCD8, complete sequence.
MT321298.1:6845-6865
AGACGATGGTTACCTTCTTGTTGTTGAGTA6845TGCTACCTCAATGCAGAGATGTTGTCTTGTTGTCTTGAACCCAAAAGAGAT
Pisum sativum dioxygenase RAMOSUS5 (RMS5) gene, complete cds.
DQ403160.1:3739-3759
ATATTGATATTAATGGTTTGTTTTGCAGTA3739TGCTACCTCAATGCAGAGATGTTGTCTTGTTGTCTTGAACCCAAAAGAGAT
Trifolium repens carotenoid cleavage dioxygenase 7 P' isoform (CCD7) gene, complete cds.
KJ127513.1:4958-4978
AACAATAATATTAATTATTTGTTTGCAGTA4958TGCTACCTCAATGCAGAGATGTTGTCTTGTTATCTTGAACCCAAAAGAGAT
Trifolium subterraneum genome assembly, chromosome: 4.
OX637464.1:51578150-51578170
ACAATGATATTAATGATTTGTTTTGCAGTA51578150TGCTACCTCAATGCAGAGATGTTGTCTTGTTATCTTGAACCCAAAAGATAT
Medicago lupulina genome assembly, chromosome: 2.
OY283140.1:38309450-38309470
AAATTATATTCATTTTTTTATTTCGCAGTA38309450TGCTACCTCAATGCAGAGATGTTGTCTTGTTATCTTGAATCCAAAAGAGAT
Lathyrus sativus genome assembly, chromosome: 3.
OZ012737.1:124833593-124833613
ATATTGATATTAACTGTTTGTTTTGCAGTA124833593TGCTACCTCAATGCAGAGATGTTGTCTTGTTATTTTGAACCCAAAAGAGAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CATCTCTGCATTGAGGTAGCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CATCTCTGCATTGAGGTAGCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.170 | 0.161 | search_plus_done; http://172.18.8.135:50400/match?q=CATCTCTGCATTGAGGTAGCA&k=0&no_gap=0&offset=0&limit=50
0.277 | 0.107 | search_minus_done; http://172.18.8.135:50400/match?q=TGCTACCTCAATGCAGAGATG&k=0&no_gap=0&offset=0&limit=44
0.283 | 0.005 | cgi_end;

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