GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-20 16:07:26, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lotus japonicus B-129 DNA, chromosome 3, complete sequence.
AP022631.1:70185497-70185520
GAGGGTTTAGAGTTTGAGAATGAGAAGGGT70185497CATCTTTTAAATCTTCAAGAATCAATATTTTGGGTTTATTCTTTTTTTTATGAA
LjNEST43g8r Lotus japonicus nodule library 5 and 7 week-old Lotus japonicus cDNA 5', mRNA sequence.
BI418619.1:4-27
TAT4TGATTCTTGAAGATTTAAAAGATGACCCTTCTCATTCTCAAACTCTAAACCCTC
Lotus japonicus genomic DNA, chromosome 3, clone: LjT06J16, TM0083.
AP004929.1:97075-97098
TTCATAAAAAAAAGAATAAACCCAAAATAT97075TGATTCTTGAAGATTTAAAAGATGACCCTTCTCATTCTCAAACTCTAAACCCTC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CATCTTTTAAATCTTCAAGAATCA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CATCTTTTAAATCTTCAAGAATCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.121 | 0.112 | search_plus_done; http://172.18.8.135:50400/match?q=CATCTTTTAAATCTTCAAGAATCA&k=0&no_gap=0&offset=0&limit=50
0.160 | 0.039 | search_minus_done; http://172.18.8.135:50400/match?q=TGATTCTTGAAGATTTAAAAGATG&k=0&no_gap=0&offset=0&limit=49
0.162 | 0.002 | cgi_end;

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