GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 15:34:30, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Sequence 2 from Patent EP2891716.
LP011984.1:1-20
1CATGAAAGTTGACCCGAACA
Sequence 5 from Patent EP2891716.
LP011987.1:1-20
1CATGAAAGTTGACCCGAACA
Sequence 9 from Patent EP2891716.
LP011991.1:1-20
1CATGAAAGTTGACCCGAACA
JP 2015526091-A/2: Porous solid matter for rapid isolation of biological molecule for nucleic acid amplification reaction from biological sample and uses thereof.
LX057148.1:1-20
1CATGAAAGTTGACCCGAACA
JP 2015526091-A/5: Porous solid matter for rapid isolation of biological molecule for nucleic acid amplification reaction from biological sample and uses thereof.
LX057151.1:1-20
1CATGAAAGTTGACCCGAACA
JP 2015526091-A/9: Porous solid matter for rapid isolation of biological molecule for nucleic acid amplification reaction from biological sample and uses thereof.
LX057155.1:1-20
1CATGAAAGTTGACCCGAACA
Capsicum annuum Takanotsume DNA, chromosome 10, sequence.
AP026705.1:241110867-241110886
GATAGGTATCCTGTGGAATTAGTCGAGGTG241110867CATGAAAGTTGACCCGAACACCATGGTCTTCACAAAAAAAAGTAATACTG
Capsicum rhomboideum cultivar Andean isolate CrT2T chromosome 6.
CP124714.1:4544585-4544604
CATAGATATCTCGTGAATCTAATCAAAGTG4544585CATGAAAGTTGACCCGAACACACAATTATCATAAGAAAAATATATAGAGT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 10.
CP124722.1:245580255-245580274
GATAGGTATCCTGTGGAATTAGTCGAGGTG245580255CATGAAAGTTGACCCGAACACCATGGTCTTCACAAAAAAAAGTAATACTG
Agrobacterium vaccinii strain B7.6 chromosome circular, complete sequence.
CP054150.1:1674693-1674712
GGCCTTTTGTTTGGTTTACAGAACCAAAGC1674693CATGAAAGTTGACCCGAACAGTGGTGGCTCAGGTCGAGATATTCAGCGCC
Capsicum annuum clone BAC CaCM421A08 genomic sequence.
GU108230.1:8876-8895
CAGTATTACTTTTTTTTGTGAAGACCATGG8876TGTTCGGGTCAACTTTCATGCACCTCGACTAATTCCACAGGATACCTATC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CATGAAAGTTGACCCGAACA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CATGAAAGTTGACCCGAACA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.332 | 0.324 | search_plus_done; http://172.18.8.135:50400/match?q=CATGAAAGTTGACCCGAACA&k=0&no_gap=0&offset=0&limit=50
0.357 | 0.025 | search_minus_done; http://172.18.8.135:50400/match?q=TGTTCGGGTCAACTTTCATG&k=0&no_gap=0&offset=0&limit=40
0.358 | 0.001 | cgi_end;

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