GGGenome | Results

2025-04-06 06:31:43, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

RBAA349TO RBAA-Castor bean cDNA library from leaves,680bp Ricinus communis cDNA clone RBAA349, mRNA sequence.
EE254564.1:34-55

AATAGCCATTCAACCATTGATATTACACAG34CATGAACCCCACAATTTACAGACCAAATACTAATCATCACAAATCCCTTT

RFAAW56TH Castor bean cDNA library from flowers,800bp Ricinus communis cDNA clone RFAAW56, mRNA sequence.
EE255510.1:109-130

AATAGCCATTCAACCATTGATATTACACAG109CATGAACCCCACAATTTACAGACCAAATACTAATCATCACAAATCCCTTTTT

RFAAF60TH Castor bean cDNA library from flowers,800bp Ricinus communis cDNA clone RFAAF60, mRNA sequence.
EE257385.1:66-87

AATAGCCATTCAACCATTGATATTACACAG66CATGAACCCCACAATTTACAGACCAAATACTAATCATCACAAATCCCTTTTT

RFABK56TH Castor bean cDNA library from flowers,800bp Ricinus communis cDNA clone RFABK56, mRNA sequence.
EE259292.1:78-99

AATAGCCATTCAACCATTGATATTACACAG78CATGAACCCCACAATTTACAGACCAAATACTAATCATCACAAATCCCTTTTT

RBAA349TH RBAA-Castor bean cDNA library from leaves,680bp Ricinus communis cDNA clone RBAA349, mRNA sequence.
EE254282.1:626-647

AAAAAGGGATTTGTGATGATTAGTATTTGG626TCTGTAAATTGTGGGGTTCATGCTGTGTAATATCAATGGTTGAATGGCTATT

RFAAA63TH Castor bean cDNA library from flowers,800bp Ricinus communis cDNA clone RFAAA63, mRNA sequence.
EE256105.1:525-546

AAAAAGGGATTTGTGATGATTAGTATTTGG525TCTGTAAATTGTGGGGTTCATGCTGTGTAATATCAATGGTTGAATGGCTATT

RFAAR27TH Castor bean cDNA library from flowers,800bp Ricinus communis cDNA clone RFAAR27, mRNA sequence.
EE257600.1:169-190

AAAAAGGGATTTGTGATGATTAGTATTTGG169TCTGTAAATTGTGGGGTTCATGCTGTGTAATATCAATGGTTGAATGGCTATT

RFAB067TH Castor bean cDNA library from flowers,800bp Ricinus communis cDNA clone RFAB067, mRNA sequence.
EE258349.1:620-641

AAAAAGGGATTTGTGATGATTAGTATTTGG620TCTGTAAATTGTGGGGTTCATGCTGTGTAATATCAATGGTTGAATGGCTATT

RFABE10TH Castor bean cDNA library from flowers,800bp Ricinus communis cDNA clone RFABE10, mRNA sequence.
EE258854.1:143-164

AAAAAGGGATTTGTGATGATTAGTATTTGG143TCTGTAAATTGTGGGGTTCATGCTGTGTAATATCAATGGTTGAATGGCTATT

RFABU85TH Castor bean cDNA library from flowers,800bp Ricinus communis cDNA clone RFABU85, mRNA sequence.
EE258998.1:627-648

AAAAAGGGATTTGTGATGATTAGTATTTGG627TCTGTAAATTGTGGGGTTCATGCTGTGTAATATCAATGGTTGAATGGCTATT

RFABL28TH Castor bean cDNA library from flowers,800bp Ricinus communis cDNA clone RFABL28, mRNA sequence.
EE259516.1:620-641

AAAAAGGGATTTGTGATGATTAGTATTTGG620TCTGTAAATTGTGGGGTTCATGCTGTGTAATATCAATGGTTGAATGGCTATT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.008 | 0.008 | search_start;
0.329 | 0.321 | search_plus_done; http://172.18.8.135:50400/match?q=CATGAACCCCACAATTTACAGA&k=0&no_gap=0&offset=0&limit=50
0.784 | 0.454 | search_minus_done; http://172.18.8.135:50400/match?q=TCTGTAAATTGTGGGGTTCATG&k=0&no_gap=0&offset=0&limit=46
0.789 | 0.005 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).