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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 15:44:41, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Pyrus pyrifolia cultivar Housui mRNA, clone: TsuENH059_01509m, 5' end sequence.
AB450731.1:289-311
CTGAGAGGACTCCGCGACGACGATGTTCTA289CATGATAATGTGGCACCGTGTATTGATGATGATGATGATGAGTATCATGATCA
Pyrus pyrifolia mRNA, clone: NFW2_05_09, 5' end sequence, expressed in flower bud.
HX762404.1:305-327
CTGAGAGGACTCCGCGACGACGATGTTCTA305CATGATAATGTGGCACCGTGTATTGATGATGATGATGATGAGTATCATGATCA
Pyrus pyrifolia mRNA, clone: NFW2_05_09, 3' end sequence, expressed in flower.
HX743573.1:570-592
TGATCATGATACTCATCATCATCATCATCA570ATACACGGTGCCACATTATCATGTAGAACATCGTCGTCGCGGAGTCCTCTCAG
TSA: Pyrus pyrifolia mRNA, contig: contig_3215revcomp.
FX433663.1:1091-1113
TGATCATGATACTCATCATCATCATCATCA1091ATACACGGTGCCACATTATCATGTAGAACATCGTCGTCGCGGAGTCCTCTCAG
TSA: Pyrus x bretschneideri Unigene37525_XinShao mRNA sequence.
JR629733.1:218-240
TGATCATGATACTCATCATCATCATCATCA218ATACACGGTGCCACATTATCATGTAGAACATCGTCGTCGCGGAGTCCTCTCAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CATGATAATGTGGCACCGTGTAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CATGATAATGTGGCACCGTGTAT | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.249 | 0.241 | search_plus_done; http://172.18.8.135:50400/match?q=CATGATAATGTGGCACCGTGTAT&k=0&no_gap=0&offset=0&limit=50
0.451 | 0.201 | search_minus_done; http://172.18.8.135:50400/match?q=ATACACGGTGCCACATTATCATG&k=0&no_gap=0&offset=0&limit=48
0.453 | 0.002 | cgi_end;

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