GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-14 16:55:03, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

GM700013A20D10 Gm-r1070 Glycine max cDNA clone Gm-r1070-5156 3', mRNA sequence.
BE820963.1:121-140
AACCACATATATTATCTGTAAAATATGAGT121CATGCCCAAGATATCCCACTTGCTTCTTTATGAATAAATGAAAGGCTTGT
Glycine max cultivar Williams 82 chromosome 4.
CP126429.1:6206000-6206019
AACCACATATATTATCTGTAAAATATGAGT6206000CATGCCCAAGATATCCCACTTGCTTCTTTATGAATAAATGAAAGGCTTGT
Geum urbanum genome assembly, chromosome: 6.
OX327002.1:55306891-55306910
CATCAACCTGGACTCCTTGAGCAGAAATTA55306891CATGCCCAAGATATCCCACTGAGGGCTGTCCAAAAGAGCACTTTGATGGC
sh82f05.y1 Gm-c1016 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1016-6682 5', mRNA sequence.
AW432763.1:336-355
ACAAGCCTTTCATTTATTCATAAAGAAGCA336AGTGGGATATCTTGGGCATGACTCATATTTTACAG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CATGCCCAAGATATCCCACT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CATGCCCAAGATATCCCACT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.104 | 0.095 | search_plus_done; http://172.18.8.135:50400/match?q=CATGCCCAAGATATCCCACT&k=0&no_gap=0&offset=0&limit=50
0.125 | 0.021 | search_minus_done; http://172.18.8.135:50400/match?q=AGTGGGATATCTTGGGCATG&k=0&no_gap=0&offset=0&limit=47
0.126 | 0.001 | cgi_end;

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