GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 05:15:31, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

MAG: Candidatus Woesebacteria bacterium isolate Ch104b chromosome, complete genome.
CP055307.1:642452-642471
TTCTATTGGCTCAAAACGGGGAAGAATGGC642452CATGCCTCCAAGTTCAGACATTTTTATTGCCATTTTTACACCTGTAACGG
Arachis hypogaea DNA, clone: 8iHA00A06, cultivar: YI-0311.
DE998444.1:24-43
TGTTTAGCCTTGTAGCGGAACCC24CATGCCTCCAAGTTCAGACAAACTCATCACACAATTGAAAGTGAAAGCAT
Arachis hypogaea DNA, clone: KIAC08M03.
DH965425.1:14-33
CATGATGCTTGGC14CATGCCTCCAAGTTCAGACAAACTCATCACACAATTGAAAGTGAAAGCAT
Arachis hypogaea cultivar Shitouqi chromosome B03.
CP030995.1:7893111-7893130
GGAAGAAGATGGTAATGCATGATGCTTGGC7893111CATGCCTCCAAGTTCAGACAAACTCATCACACAATTGAAAGTGAAAGCAT
Arachis ipaensis cultivar K30076 chromosome 03.
CP049894.1:7829416-7829435
GGAAGAAGATGGTAATGCATGATGCTTGGC7829416CATGCCTCCAAGTTCAGACAAACTCATCACACAATTGAAAGTGAAAGCAT
Gymnosoma rotundatum genome assembly, chromosome: 5.
OU744340.1:129100357-129100376
AATACCTCAAAGTCTAGTCGCGTCCTGCCT129100357CATGCCTCCAAGTTCAGACAGGATTGCTCTATTTATTATTCAATAAAGAT
Arachis hypogaea cultivar Shitouqi chromosome A03.
CP030985.1:7097892-7097911
ATGCTTTCACTTTCAATTGTGTGATGAGTT7097892TGTCTGAACTTGGAGGCATGGCCAAGCATCATGCATTACCATCTTCTTCC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CATGCCTCCAAGTTCAGACA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CATGCCTCCAAGTTCAGACA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.411 | 0.403 | search_plus_done; http://172.18.8.135:50400/match?q=CATGCCTCCAAGTTCAGACA&k=0&no_gap=0&offset=0&limit=50
0.525 | 0.114 | search_minus_done; http://172.18.8.135:50400/match?q=TGTCTGAACTTGGAGGCATG&k=0&no_gap=0&offset=0&limit=44
0.526 | 0.001 | cgi_end;

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