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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-08 02:33:05, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Mus musculus genome assembly, chromosome: 19.
OW971561.1:2971624-2971641
CTGGGCTTCCATGTCGCTCCTGGCAGAGTC2971624CATGCCTCGCTGGAGAAGCAGAATGAGACAGACGAGGAGCAGAGGCTA
Mus musculus genome assembly, chromosome: 19.
OW971592.1:2756287-2756304
CTGGGCTTCCATGTCGCTCCTGGCAGAGTC2756287CATGCCTCGCTGGAGAAGCAGAATGAGACAGACGAGGAGCAGAGGCTA
Mus musculus genome assembly, chromosome: 19.
OW971613.1:2901747-2901764
CTGGGCTTCCATGTCGCTCCTGGCAGAGTC2901747CATGCCTCGCTGGAGAAGCAGAATGAGACAGACGAGGAGCAGAGGCTA
Mus musculus domesticus genome assembly, chromosome: 19.
OW971623.1:2776492-2776509
CTGGGCTTCCATGTCGCTCCTGGCAGAGTC2776492CATGCCTCGCTGGAGAAGCAGAATGAGACAGACGAGGAGCAGAGGCTA
Mus musculus genome assembly, chromosome: 19.
OW971655.1:3503325-3503342
CTGGGCTTCCATGTCGCTCCTGGCAGAGTC3503325CATGCCTCGCTGGAGAAGCAGAATGAGACAGACGAGGAGCAGAGGCTA
Mus musculus molossinus genome assembly, chromosome: 19.
OW971676.1:3107624-3107641
CTGGGCTTCCATGTCGCTCCTGGCAGAGTC3107624CATGCCTCGCTGGAGAAGCAGAATGAGACAGACGAGGAGCAGAGGCTA
Mus spretus genome assembly, chromosome: 19.
OW971697.1:2862061-2862078
CTGGGCTTCCATGTCGCTCCTGGCAGAGTC2862061CATGCCTCGCTGGAGAAGCAGAGTGAGACAGACGCTACATTTCGAGTT
Mus musculus genome assembly, chromosome: 19.
OW971709.1:3138615-3138632
CTGGGCTTCCATGTCGCTCCTGGCAGAGTC3138615CATGCCTCGCTGGAGAAGCAGAATGAGACAGACGAGGAGCAGAGGCTA
Mus musculus genome assembly, chromosome: 19.
OW971739.1:2733315-2733332
CTGGGCTTCCATGTCGCTCCTGGCAGAGTC2733315CATGCCTCGCTGGAGAAGCAGAATGAGACAGACGAGGAGCAGAGGCTA
Mus musculus genome assembly, chromosome: 19.
OW971760.1:3128610-3128627
CTGGGCTTCCATGTCGCTCCTGGCAGAGTC3128610CATGCCTCGCTGGAGAAGCAGAATGAGACAGACGAGGAGCAGAGGCTA
Mus musculus musculus genome assembly, chromosome: 19.
OW971781.1:2872892-2872909
CTGGGCTTCCATGTCGCTCCTGGCAGAGTC2872892CATGCCTCGCTGGAGAAGCAGAATGAGACAGACGAGGAGCAGAGGCTA
Mus musculus genome assembly, chromosome: 19.
OW971802.1:2663112-2663129
CTGGGCTTCCATGTCGCTCCTGGCAGAGTC2663112CATGCCTCGCTGGAGAAGCAGAATGAGACAGACGAGGAGCAGAGGCTA
Mus musculus genome assembly, chromosome: 19.
OW971823.1:3132780-3132797
CTGGGCTTCCATGTCGCTCCTGGCAGAGTC3132780CATGCCTCGCTGGAGAAGCAGAATGAGACAGACGAGGAGCAGAGGCTA
Mus musculus castaneus genome assembly, chromosome: 19.
OW971835.1:2889770-2889787
CTGGGCTTCCATGTCGCTCCTGGCAGAGTC2889770CATGCCTCGCTGGAGAAGCAGAATGAGACAGACGAGGAGCAGAGGCTA
Mus musculus genome assembly, chromosome: 19.
OW971854.1:2753513-2753530
CTGGGCTTCCATGTCGCTCCTGGCAGAGTC2753513CATGCCTCGCTGGAGAAGCAGAATGAGACAGACGAGGAGCAGAGGCTA
Mus musculus genome assembly, chromosome: 19.
OX389813.1:7749014-7749031
CTGGGCTTCCATGTCGCTCCTGGCAGAGTC7749014CATGCCTCGCTGGAGAAGCAGAATGAGACAGACGAGGAGCAGAGGCTA
Mus musculus genome assembly, chromosome: 19.
OX390162.1:4040204-4040221
CTGGGCTTCCATGTCGCTCCTGGCAGAGTC4040204CATGCCTCGCTGGAGAAGCAGAATGAGACAGACGAGGAGCAGAGGCTA
Mus musculus genome assembly, chromosome: 19.
OX439033.1:3995143-3995160
CTGGGCTTCCATGTCGCTCCTGGCAGAGTC3995143CATGCCTCGCTGGAGAAGCAGAATGAGACAGACGAGGAGCAGAGGCTA
Bufo bufo genome assembly, chromosome: 6.
LR991672.1:288431639-288431656
TATTATCACTGGCTTCATTGGTGCATTGTG288431639CATGCCTCGCTGGAGAAGAACCCTGGACTATTCTCACAGCAAGGCCTC
GH_HYPT_01-01-27R_A11_InvR_29Apr04_095_R Stem - 3 weeks after planting Gossypium hirsutum cDNA, mRNA sequence.
DW226878.1:396-413
TCGACTTCTTGATGGTCAGAACAAGATTGG396CATGCCTCGCTGGAGAAGTGTAAAATTGATGTCTCTCCATTATTCTGA
Gossypium hirsutum cultivar TM1 chromosome A11.
CP023743.1:5536637-5536654
TCGACTCCTTGATGGTCAGAACAAGATTGG5536637CATGCCTCGCTGGAGAAGTGTAAAATTGATGTCTCTCCATTATTCTGA
Gossypium raimondii isolate D5-4 chromosome D5_11.
CP032563.1:56849691-56849708
TCGACTCCTTGATTATCAGAACAAGATCGG56849691CATGCCTCGCTGGAGAAGTGTAAAACTGATGTCTCTCCATTATTCTGA
Gossypium rotundifolium isolate GPK201 chromosome 11.
CP106732.1:172728740-172728757
TCGACTCCTTGATGGTCAGAACAAGGTCTG172728740CATGCCTCGCTGGAGAAGTGTAAAATTGATGTCTCTCCATTATTCCGA
Neofusicoccum laricinum strain HLJ-QQHE-4 chromosome 13.
CP123726.1:522405-522422
GAGTGCGCACGCCCTGCCACCATGCGGACA522405CATGCCTCGCTGGAGAAGGACGAGGAGATCAACCGCGCCGCCTGGGTC
UNVERIFIED_CONTAM: Avena longiglumis isolate 447 chromosome 1.
CP125973.1:146398298-146398315
CTGGCGTGGCGGCATGGGATTTGTGGGTGG146398298CATGCCTCGCTGGAGAAGTTCGCCCCTTGAGTCGCCGCCCTCCTTGAC
Aegilops speltoides subsp. speltoides genome assembly, chromosome: 2B.
OX082598.1:546914348-546914365
CCGGCATGTCGCGGAAGCGACCTCCCTTGC546914348CATGCCTCGCTGGAGAAGGAAGGATTTCGCTTGTTAATATACGAGATC
Hordeum bulbosum genome assembly, chromosome: 4H_1.
OY737380.1:297544096-297544113
AACTATACCATTTTTGGTTTGCAATCTAGA297544096CATGCCTCGCTGGAGAAGAACATTGAATCTACCGATGCTTGAGAGAAG
Hordeum bulbosum genome assembly, chromosome: 4H_2.
OY737387.1:297119741-297119758
AACTATACCATTTTTGGTTTGCAATCTAGA297119741CATGCCTCGCTGGAGAAGAACATTGAATCTACCGATGCTTGAGAGAAG
Hordeum bulbosum genome assembly, chromosome: 4H_1.
OY737412.1:291295794-291295811
AACTATACCATTTCTGGTTTGCAATCTAGA291295794CATGCCTCGCTGGAGAAGAACATTGAATCTACCGATGCTTGAGAGAAG
Hordeum bulbosum genome assembly, chromosome: 4H_2.
OY737419.1:279883274-279883291
AACTATACCATTTCTGGTTTGCAATCTAGA279883274CATGCCTCGCTGGAGAAGAACATTGAATCTACCGATGCTTGAGAGAAG
Hordeum bulbosum genome assembly, chromosome: 4H_1.
OY737430.1:306942102-306942119
AACTATACCATTTCTGGTTTGCAATCTAGA306942102CATGCCTCGCTGGAGAAGAACATTGAATCTACCGATGCTTGAGAGAAG
Hordeum bulbosum genome assembly, chromosome: 4H_2.
OY737437.1:285815259-285815276
AACTATACCATTTCTGGTTTGCAATCTAGA285815259CATGCCTCGCTGGAGAAGAACATTGAATCTACCGATGCTTGAGAGAAG
Hordeum bulbosum genome assembly, chromosome: 4H_1.
OY737521.1:302003087-302003104
AACTATACCATTTCTAGTTTGCAATCTAGA302003087CATGCCTCGCTGGAGAAGAACATTGAATCTACCGATGCTTGAGAGAAG
Hordeum bulbosum genome assembly, chromosome: 4H_2.
OY737528.1:278606646-278606663
AACTATACCATTTCTAGTTTGCAATCTAGA278606646CATGCCTCGCTGGAGAAGAACATTGAATCTACCGATGCTTGAGAGAAG
Hordeum bulbosum genome assembly, chromosome: 4H_3.
OY737535.1:290289984-290290001
AACTATACCATTTCTGGTTTGCAATCTAGA290289984CATGCCTCGCTGGAGAAGAACATTGAATCTACCGATGCTTGAGAGAAG
Hordeum bulbosum genome assembly, chromosome: 6H_3.
OY737537.1:283738133-283738150
AATGATACCATTTCCAGTTTGCAATCCAGA283738133CATGCCTCGCTGGAGAAGAACATTGAATCTACCGGTGCTCAAGAGAAG
Hordeum bulbosum genome assembly, chromosome: 4H_4.
OY737542.1:279320868-279320885
AACTATACCATTTCTAGTTTGCAATCTAGA279320868CATGCCTCGCTGGAGAAGAACATTGAATCTACCGATGCTTGAGAGAAG
Hordeum bulbosum genome assembly, chromosome: 4H_2.
OY737621.1:300343642-300343659
AACTATACCATTTCTGGTTTGCAATCTAGA300343642CATGCCTCGCTGGAGAAGAACATTGAATCTACCGATGCTTGAGAGAAG
Hordeum bulbosum genome assembly, chromosome: 4H_3.
OY737628.1:230050843-230050860
AACTATACCATTTTTGGTTTGCAATCTAGA230050843CATGCCTCGCTGGAGAAGAACATTGAATCTACCGATGCTTGAGAGAAG
Paenibacillus sp. RUD330 chromosome, complete genome.
CP022655.2:406153-406170
GAGCAGTATGTGTTCACGAACGGGCAAGGC406153CATGCCTCGCTGGAGAAGGAAGTGAAGAAGGCTTTCCGCAAGCTGCAC
Mus musculus BAC clone RP23-453G12 from chromosome 19, complete sequence.
AC127271.3:90449-90466
TAGCCTCTGCTCCTCGTCTGTCTCATTCTG90449CTTCTCCAGCGAGGCATGGACTCTGCCAGGAGCGACATGGAAGCCCAG
Mus musculus BAC clone RP23-391B20 from 19, complete sequence.
AC131692.5:232951-232968
TAGCCTCTGCTCCTCGTCTGTCTCATTCTG232951CTTCTCCAGCGAGGCATGGACTCTGCCAGGAGCGACATGGAAGCCCAG
Martes martes genome assembly, chromosome: 6.
OY734068.1:19237476-19237493
ACTAAGCAAATATGTAGCAGCACCATCTTC19237476CTTCTCCAGCGAGGCATGGTGCCAGATAATATGCCGTACAAGATATTT
Phalacrocorax carbo genome assembly, chromosome: 5.
OY997606.1:69760149-69760166
CAGTGACCAGGCAGCTGCAGCGGTTGGCCG69760149CTTCTCCAGCGAGGCATGGTGCGTGAGACAATCTTTCCCCGAGCCTTT
Sequence 17784 from patent US 7557201.
GP486787.1:309-326
TCAGAATAATGGAGAGACATCAATTTTACA309CTTCTCCAGCGAGGCATGCCAATCTTGTTCTGACCATCAAGGAGTCGA
Mus musculus targeted KO-first, conditional ready, lacZ-tagged mutant allele Dpf2:tm1a(EUCOMM)Hmgu; transgenic.
JN948124.1:157-174
TAGCCTCTGCTCCTCGTCTGTCTCATTCTG157CTTCTCCAGCGAGGCATGGACTCTGCCAGGAGCGACATGGAAGCCCAG
Mus musculus targeted non-conditional, lacZ-tagged mutant allele Dpf2:tm1e(EUCOMM)Hmgu; transgenic.
JN952289.1:157-174
TAGCCTCTGCTCCTCGTCTGTCTCATTCTG157CTTCTCCAGCGAGGCATGGACTCTGCCAGGAGCGACATGGAAGCCCAG
Mus musculus targeted non-conditional, lacZ-tagged mutant allele Cdc42ep2:tm1e(EUCOMM)Hmgu; transgenic.
JN954321.1:13595-13612
TAGCCTCTGCTCCTCGTCTGTCTCATTCTG13595CTTCTCCAGCGAGGCATGGACTCTGCCAGGAGCGACATGGAAGCCCAG
Mus musculus targeted KO-first, conditional ready, lacZ-tagged mutant allele Cdc42ep2:tm1a(EUCOMM)Hmgu; transgenic.
JN962254.1:13595-13612
TAGCCTCTGCTCCTCGTCTGTCTCATTCTG13595CTTCTCCAGCGAGGCATGGACTCTGCCAGGAGCGACATGGAAGCCCAG
Gossypium turneri isolate D10-2 chromosome D10_11.
CP032581.1:9059183-9059200
TCAGAATAATGGAGAGACATCAATTTTACA9059183CTTCTCCAGCGAGGCATGCCGATCTTGTTCTGACCATCAAGGAGTCGA
Musa troglodytarum cultivar karat chromosome 10.
CP097503.1:20673660-20673677
GAGCAGTCTTTCTATTCCCCGTCTTCCCAA20673660CTTCTCCAGCGAGGCATGGTAGGCCGTTGGTAGCTCGAGTTCTGTTCG
Musa troglodytarum cultivar karat chromosome 10.
CP097503.1:20893289-20893306
GCAGTCTTTCTATTCCCGACGTCTTCCCAA20893289CTTCTCCAGCGAGGCATGGTAGGCCGTTGGTAGCTCGAGTTCTGTTCG
Gossypium bickii isolate GPG1lz chromosome 11.
CP106711.1:12676702-12676719
TGAGAATAATGGAGAGACATCAATTTTACA12676702CTTCTCCAGCGAGGCATGCAGATCTTGTTCTGACCATCAAGGAGTCGA
Rhododendron vialii isolate Sample 1 chromosome 12b.
CP127063.1:1678835-1678852
ACAGTGCCCCGGCCCCTCATAGCGAGAGAG1678835CTTCTCCAGCGAGGCATGGTGCTCCAGTTAGTTGTGCTTCAGCTTCTA
Rhododendron vialii isolate Sample 1 chromosome 12a.
CP127076.1:1914265-1914282
ACAGTGCCCCGGCCCCTCATAGCGAGAGAG1914265CTTCTCCAGCGAGGCATGGTGCTCCAGTTAGTTGTGCTTCAGCTTCTA
Cenchrus americanus genome assembly, chromosome: PMC23DB6.
OX387244.1:7888403-7888420
CGCTAGGGAGCTCCGGCCCGGAGGCACTAC7888403CTTCTCCAGCGAGGCATGGGGCGCCGCAGATGAGCTCCTAGTGAGGTC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX590736.1:112658871-112658888
CTTCTCTTGAGCACCAGCAGATTCAATGCT112658871CTTCTCCAGCGAGGCATGTCTGGATTGCAAACGGGAAATGGTACCGTT
Hordeum bulbosum genome assembly, chromosome: 6H_2.
OY737389.1:298594958-298594975
CTTCTCTTGAGCACCGGTAGATTCAATGTT298594958CTTCTCCAGCGAGGCATGTCTGGATTGCAAACTGGAAATGGTATCATT
Hordeum bulbosum genome assembly, chromosome: 6H_1.
OY737432.1:290386978-290386995
CTTCTCTTGAGCACCGGTAGATTCAATGTT290386978CTTCTCCAGCGAGGCATGTCTGGATTGCAAACTGGAAATGGTATCATT
Hordeum bulbosum genome assembly, chromosome: 6H_1.
OY737523.1:267676677-267676694
CTTCTCTTGAGCACCGGTAGATTCAATGTT267676677CTTCTCCAGCGAGGCATGTCTGGATTGCAAACTGGAAATGGTATCATT
Hordeum bulbosum genome assembly, chromosome: 6H_2.
OY737530.1:290220033-290220050
CTTCTCTTGAGCACCGGTAGATTCAATGTT290220033CTTCTCCAGCGAGGCATGTCTGGATTGCAAACTGGAAATGGTATCATT
Cenchrus americanus genome assembly, chromosome: Pg6.
OZ001402.1:10264247-10264264
CGCTAGGGAGCTCCGGCCCGGAGGCACTAC10264247CTTCTCCAGCGAGGCATGGGGCGCCGCAGATGAGCTCCTAGTGAGGTC
Cenchrus americanus genome assembly, chromosome: Pg3.
OZ001407.1:324204485-324204502
CGCTAGGGAGCTCCGGCCCGGAGGCACTAC324204485CTTCTCCAGCGAGGCATGGGGCGCCGCAGATGAGCTCCTAGTGAGGTC
Acidothermaceae bacterium B102 DNA, complete genome.
AP028633.1:4674611-4674628
ATCGGTCGTTCACAGTTCCAAAAGACGTCA4674611CTTCTCCAGCGAGGCATGCACTCGTTCGGCGAGAGCGAAGCCCGGAAC
Capitulum mitella isolate CP1-10 chromosome 7.
CP099845.1:20654327-20654344
CGAGCGCGACGAGCATCATCCGCGAATACG20654327CTTCTCCAGCGAGGCATGAACACTGGAGGCTTTTCTCGGCTTCGCCAT
Tiliacea aurago genome assembly, chromosome: 15.
OX402591.1:26812759-26812776
GAATTGTCTGAAGTGACCTCGAAACCTACC26812759CTTCTCCAGCGAGGCATGGAGACGTTATCTGTATGAAACTGTTCACCG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CATGCCTCGCTGGAGAAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CATGCCTCGCTGGAGAAG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.422 | 0.413 | search_plus_done; http://172.18.8.135:50400/match?q=CATGCCTCGCTGGAGAAG&k=0&no_gap=0&offset=0&limit=50
0.577 | 0.155 | search_minus_done; http://172.18.8.135:50400/match?q=CTTCTCCAGCGAGGCATG&k=0&no_gap=0&offset=0&limit=10
0.593 | 0.016 | cgi_end;

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