GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 18:15:55, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Hordeum vulgare genome assembly, chromosome: 2H.
OU701464.1:468597130-468597148
GGCGACAAGATTGTTGATGTAGATCACCGT468597130CATGCTCCTTGCCTCAATGGCACTCCGGTGCCACGAGGAGAGGGGGGAG
Acomys russatus genome assembly, chromosome: 1.
LR877212.1:58241896-58241914
GTGATTGGGATTGTGCTGCAGAGTCTTACT58241896CATTGAGGCAAGGAGCATGCATTTCTAAGCTATGTCTTGAAAAATCACC
Anas acuta genome assembly, chromosome: 21.
OZ009984.1:3444802-3444820
TGCTCGTGTGCTAACGATGGAACCATTCAG3444802CATTGAGGCAAGGAGCATGGAAGAGTACTTGGAGACATGGCCCATTGCC
Uncultured organism MedDCM-OCT-S08-C256 genomic sequence.
GU943132.1:13846-13864
AAGGCCCACTTCATCGGTAGGCCCTTCATT13846CATTGAGGCAAGGAGCATGTGTGCTGCGAGATGTCGCTCATCGTTTGAG
Phoenix dactylifera clone dpS2X sex-determination region sequence.
MH680998.1:92143-92161
GAAATTTGATCTTCATGTTCATATTTGTTG92143CATTGAGGCAAGGAGCATGCCTTTGTTATTGTTAGTGTTGAACCATGCG
Patella vulgata genome assembly, chromosome: 5.
OW026352.2:22448529-22448547
AATTCCTGCACTTTAGTTCATAATTTCTAT22448529CATTGAGGCAAGGAGCATGGTTTTGTTCCCAAGCTTGTACGTGACATGA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CATGCTCCTTGCCTCAATG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CATGCTCCTTGCCTCAATG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.091 | 0.083 | search_plus_done; http://172.18.8.135:50400/match?q=CATGCTCCTTGCCTCAATG&k=0&no_gap=0&offset=0&limit=50
0.116 | 0.025 | search_minus_done; http://172.18.8.135:50400/match?q=CATTGAGGCAAGGAGCATG&k=0&no_gap=0&offset=0&limit=49
0.119 | 0.003 | cgi_end;

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