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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-03-07 16:59:12, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Peromyscus eremicus genome assembly, chromosome: 8b.
OX460402.1:54257889-54257908
TCTCAACAAAAGGCACTACGTCGGCAGGGA54257889CATGCTTGCCGAGTTTCACTGGCAACCAGACCAGCTTCCGGCTCAGTAAG
Peromyscus eremicus genome assembly, chromosome: 8b.
OX460474.1:54651504-54651523
TCTCAACAAAAGGCACTACGTCGGCAGGGA54651504CATGCTTGCCGAGTTTCACTGGCAACCAGACCAGCTTCCGGCTCAGTAAG
Mesoplodon mirus genome assembly, chromosome: 14.
OZ205428.1:1573889-1573908
GCCTTTTACCCCTGGATATTCAACCAGGAA1573889CATGCTTGCCGAGTTTCACTCTGTGGCAACTTTTTTTTTTTTTAATGAAT
Malus ioensis cultivar PI590015 chromosome 1.
CP154741.1:1893026-1893045
CACATCCACCAATCACAATACCTAGCATTG1893026CATGCTTGCCGAGTTTCACTTTCTTCCTCGGTTTAGAATTAGGCGGTTGA
Avena sativa genome assembly, chromosome: 7A.
OX371442.1:6386084-6386103
TACATTGTATTCATGCAGTACTTGATGCCT6386084CATGCTTGCCGAGTTTCACTACCATTACCACACAAATTTTAGATGAGTTT
Pyrus communis genome assembly, chromosome: 16.
OY757083.1:1617458-1617477
CACATCCACCAATCACAATACCTAGCATTG1617458CATGCTTGCCGAGTTTCACTTTCTTCCTCGGTTTAGAATTAGGTGGTTGA
Karpatiosorbus bristoliensis genome assembly, chromosome: 15C.
OZ287419.1:1537902-1537921
CACATCCACCAATCACAATACCTAGCATTG1537902CATGCTTGCCGAGTTTCACTTTCTTCCTCGGTTTAGAATTAGGTGGCTGA
Karpatiosorbus bristoliensis genome assembly, chromosome: 15A.
OZ287469.1:1521056-1521075
CACATCCACCAATCACAATACCTAGCATTG1521056CATGCTTGCCGAGTTTCACTTTCTTCCTCGGTTTAGAATTAGGTGGTTGA
Karpatiosorbus bristoliensis genome assembly, chromosome: 15B.
OZ287470.1:1945783-1945802
CACATCCACCAATCACAATACCTAGCATTG1945783CATGCTTGCCGAGTTTCACTTTCTTCCTCGGTTTAGAATTAGGTGGTTGA
Lissotriton vulgaris genome assembly, chromosome: 12.
OZ183364.1:177895760-177895779
GGATGAAAATCATTGCCAACAGTCAAAGTA177895760CATGCTTGCCGAGTTTCACTTAAACACTAGTGGCTGCCATTCTATCAATT
TSA: Pyrus x bretschneideri Unigene89636_XinShao mRNA sequence.
JR673215.1:563-582
TCAACCACCTAATTCTAAACCGAGGAAGAA563AGTGAAACTCGGCAAGCATGCAATGCTAGGTATTGTGATTGGTGGATGTG
Malus hybrid cultivar cultivar Flame chromosome 1.
CP141910.1:42352072-42352091
TCAACCACCTAATTCTAAACCGAGGAAGAA42352072AGTGAAACTCGGCAAGCATGCAATGCTAGGTATTGTGATTGGTGGATGTG
Malus hybrid cultivar cultivar Flame chromosome 1.
CP141927.1:31807862-31807881
TCAACCACCTAATTCTAAACCGAGGAAGAA31807862AGTGAAACTCGGCAAGCATGCAATGCTAGGTATTGTGATTGGTGGATGTG
Malus hybrid cultivar cultivar Royalty chromosome 1.
CP141953.1:30101750-30101769
TCAACCACCTAATTCTAAACCGAGGAAGAA30101750AGTGAAACTCGGCAAGCATGCAATGCTAGGTATTGTGATTGGTGGATGTG
Malus hybrid cultivar cultivar Royalty chromosome 1.
CP141970.1:31869244-31869263
TCAACCACCTAATTCTAAACCGAGGAAGAA31869244AGTGAAACTCGGCAAGCATGCAATGCTAGGTATTGTGATTGGTGGATGTG
Malus hybrid cultivar cultivar SH6 chromosome 1.
CP143358.1:31438735-31438754
TCAACCACCTAATTCTAAACCGAGGAAGAA31438735AGTGAAACTCGGCAAGCATGCAATGCTAGGTATTGTGATTGGTGGATGTG
Malus hybrid cultivar cultivar SH6 chromosome 1.
CP143375.1:29891038-29891057
TCAACCACCTAATTCTAAACCGAGGAAGAA29891038AGTGAAACTCGGCAAGCATGCAATGCTAGGTATTGTGATTGGTGGATGTG
Malus domestica cultivar Red Fuji chromosome 1.
CP147793.1:31593641-31593660
TCAACCACCTAATTCTAAACCGAGGAAGAA31593641AGTGAAACTCGGCAAGCATGCAATGCTAGGTATTGTGATTGGTGGATGTG
Malus domestica cultivar Red Fuji chromosome 1.
CP147810.1:30746051-30746070
TCAACCACCTAATTCTAAACCGAGGAAGAA30746051AGTGAAACTCGGCAAGCATGCAATGCTAGGTATTGTGATTGGTGGATGTG
Malus ioensis cultivar PI590015 chromosome 1.
CP154724.1:30382180-30382199
TCAACCGCCTAATTCTAAACCGAGGAAGAA30382180AGTGAAACTCGGCAAGCATGCAATGCTAGGTATTGTGATTGGTGGATGTG
Malus coronaria cultivar PI590014 chromosome 1.
CP154758.1:32011499-32011518
TCAACCGCCTAATTCTAAACCGAGGAAGAA32011499AGTGAAACTCGGCAAGCATGCAATGCTAGGTATTGTGATTGGTGGATGTG
Malus coronaria cultivar PI590014 chromosome 1.
CP154775.1:32824630-32824649
TCAACCGCCTAATTCTAAACCGAGGAAGAA32824630AGTGAAACTCGGCAAGCATGCAATGCTAGGTATTGTGATTGGTGGATGTG
Chaenomeles sinensis isolate sampleA chromosome 06.
CP162369.1:25957990-25958009
TCAACCATCTAATTCTAAACCGAGGAAGAA25957990AGTGAAACTCGGCAAGCATGCAATGCTAGGTATTGTGATCGGTGGATGTG
Malus domestica cultivar WA 38 chromosome 1B.
CP165684.1:32003820-32003839
TCAACCACCTAATTCTAAACCGAGGAAGAA32003820AGTGAAACTCGGCAAGCATGCAATGCTAGGTATTGTGATTGGTGGATGTG
Malus domestica cultivar WA 38 chromosome 1A.
CP165701.1:31242709-31242728
TCAACCACCTAATTCTAAACCGAGGAAGAA31242709AGTGAAACTCGGCAAGCATGCAATGCTAGGTATTGTGATTGGTGGATGTG
Malus domestica cultivar Golden Delicious chromosome 01.
CP168765.1:30302133-30302152
TCAACCACCTAATTCTAAACCGAGGAAGAA30302133AGTGAAACTCGGCAAGCATGCAATGCTAGGTATTGTGATTGGTGGATGTG
Malus domestica cultivar Golden Delicious chromosome 01.
CP168782.1:30648230-30648249
TCAACCACCTAATTCTAAACCGAGGAAGAA30648230AGTGAAACTCGGCAAGCATGCAATGCTAGGTATTGTGATTGGTGGATGTG
Malus sylvestris genome assembly, chromosome: 1.
OU696503.1:28311914-28311933
TCAACCACCTAATTCTAAACCGAGGAAGAA28311914AGTGAAACTCGGCAAGCATGCAATGCTAGGTATTGTGATTGGTGGATGTG
Malus domestica genome assembly, chromosome: 1.
OU696677.1:28262828-28262847
TCAACCACCTAATTCTAAACCGAGGAAGAA28262828AGTGAAACTCGGCAAGCATGCAATGCTAGGTATTGTGATTGGTGGATGTG
Malus domestica genome assembly, chromosome: 1.
OU744542.1:32032888-32032907
TCAACCACCTAATTCTAAACCGAGGAAGAA32032888AGTGAAACTCGGCAAGCATGCAATGCTAGGTATTGTGATTGGTGGATGTG
Malus domestica genome assembly, chromosome: 1.
OU744953.1:31629286-31629305
TCAACCACCTAATTCTAAACCGAGGAAGAA31629286AGTGAAACTCGGCAAGCATGCAATGCTAGGTATTGTGATTGGTGGATGTG
Malus domestica genome assembly, chromosome: 1.
OU744991.1:28505331-28505350
TCAACCACCTAATTCTAAACCGAGGAAGAA28505331AGTGAAACTCGGCAAGCATGCAATGCTAGGTATTGTGATTGGTGGATGTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CATGCTTGCCGAGTTTCACT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CATGCTTGCCGAGTTTCACT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.333 | 0.324 | search_plus_done; http://172.18.8.135:50900/match?q=CATGCTTGCCGAGTTTCACT&k=0&no_gap=0&offset=0&limit=50
0.661 | 0.328 | search_minus_done; http://172.18.8.135:50900/match?q=AGTGAAACTCGGCAAGCATG&k=0&no_gap=0&offset=0&limit=40
0.676 | 0.015 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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