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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-03-24 09:53:16, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Vigna angularis mRNA, clone: VES11P02.
HX946589.1:38-57
CCAAAGCCATTTGTTCAGCTTCGATCGTGC38CATGGCGAAGAAGAAGGAAGCGTGGCTGCTGCTGCTGCTGCTCCTGATAT
Ecdyonurus torrentis genome assembly, chromosome: X.
OX439127.1:4633149-4633168
ACATACGATACGGATAGTGAAAGAAAGCAA4633149CATGGCGAAGAAGAAGGAAGCATGCAAGCGAAGTGGCTCTTGAAAAATTC
Ecdyonurus torrentis genome assembly, chromosome: 1.
OX439128.1:53181308-53181327
ACATACGATACGGATAGTGAAAGGAAGCAA53181308CATGGCGAAGAAGAAGGAAGAATGCAAGCGAAGCGGCTCTTGAAAAATTC
Ecdyonurus torrentis genome assembly, chromosome: 1.
OX439128.1:55461052-55461071
ACATACGATACGGATAGTGAAAGAAAGCAA55461052CATGGCGAAGAAGAAGGAAGAATGCAAGCGAAGCGGCTCTTGAAAAATCC
Ecdyonurus torrentis genome assembly, chromosome: 4.
OX439131.1:44341809-44341828
AACATACGAATAGTGAAAAGAATTAAGCAA44341809CATGGCGAAGAAGAAGGAAGAATGCAAGCGAAGCGGCTCTTGAAAAATCC
Ecdyonurus torrentis genome assembly, chromosome: 5.
OX439132.1:44518106-44518125
ACATACGATACGGATAGTGAAAGAAAGCAA44518106CATGGCGAAGAAGAAGGAAGAATGCAAGCGAAGCGGCTCTTGAAAAATTC
Ecdyonurus torrentis genome assembly, chromosome: 6.
OX439133.1:2914916-2914935
AACATACGAATAGTGAAAAGAATTAAGCAA2914916CATGGCGAAGAAGAAGGAAGAATGCAAGCGAAGCGGCTCTTGAAAAATCC
Ecdyonurus torrentis genome assembly, chromosome: 6.
OX439133.1:17848512-17848531
AACATACGAATAGTGAAAAGAATTAAGCAA17848512CATGGCGAAGAAGAAGGAAGAATGCAAGCGAAGCGGCTCTTGAAAAATCC
Ecdyonurus torrentis genome assembly, chromosome: 6.
OX439133.1:21608783-21608802
AACATACGAATAGTGAAAAGAATTAAGCAA21608783CATGGCGAAGAAGAAGGAAGAATGCAAGCGAAGCGGCTCTTGAAAAATCC
Ecdyonurus torrentis genome assembly, chromosome: 6.
OX439133.1:34604794-34604813
AACATACGAATAGTGAAAAGAATTAAGCAA34604794CATGGCGAAGAAGAAGGAAGAATGCAAGCGAAGCGGCTCTTGAAAAATCC
Ecdyonurus torrentis genome assembly, chromosome: 7.
OX439134.1:1171238-1171257
AACATACGAATAGTGAAAAGAATTAAGCAA1171238CATGGCGAAGAAGAAGGAAGAATGCAAGCGAAGCGGCTCTTGAAAAATCC
Ecdyonurus torrentis genome assembly, chromosome: 7.
OX439134.1:1265143-1265162
ACATACGATACGGATAGGGAAAGAAAGCAA1265143CATGGCGAAGAAGAAGGAAGAATGCAAGCGAAGCGGCTCTTGAAAAATCC
Ecdyonurus torrentis genome assembly, chromosome: 7.
OX439134.1:24271173-24271192
ACATACGATACGGATAGTGAAAGAAAGCAA24271173CATGGCGAAGAAGAAGGAAGAATGCAAGCGAAGCGGCTCTTGAAAAATTC
Ecdyonurus torrentis genome assembly, chromosome: 7.
OX439134.1:24287170-24287189
ACATACGATACGGATAGTGAAAGAAAGCAA24287170CATGGCGAAGAAGAAGGAAGAATGCAAGCGAAGCGGCTCTTGAAAAATTC
Ecdyonurus torrentis genome assembly, chromosome: 7.
OX439134.1:24322972-24322991
ACATACGATACGGATAGTGAAAGAAAGCAA24322972CATGGCGAAGAAGAAGGAAGAATGCAAGCGAAGCGGCTCTTGAAAAATTC
Ecdyonurus torrentis genome assembly, chromosome: 7.
OX439134.1:24338591-24338610
ACATACGATACGGATAGTGAAAGAAAGCAA24338591CATGGCGAAGAAGAAGGAAGAATGCAAGCGAAGCGGCTCTTGAAAAATTC
Ecdyonurus torrentis genome assembly, chromosome: 7.
OX439134.1:24362853-24362872
ACATACGATACGGATAGTGAAAGAAAGCAA24362853CATGGCGAAGAAGAAGGAAGAATGCAAGCGAAGCGGCTCTTGAAAAATTC
Ecdyonurus torrentis genome assembly, chromosome: 7.
OX439134.1:24389703-24389722
ACATACGATACGGATAGTGAAAGAAAGCAA24389703CATGGCGAAGAAGAAGGAAGAATGCAAGCGAAGCGGCTCTTGAAAAATTC
Ecdyonurus torrentis genome assembly, chromosome: 8.
OX439135.1:13002521-13002540
AACATACGAATAGTGAAAAGAATTAAGCAA13002521CATGGCGAAGAAGAAGGAAGAATGCAAGCGAAGCGGCTCTTGAAAAATCC
Ecdyonurus torrentis genome assembly, chromosome: 10.
OX439137.1:832149-832168
AACATACGAATAGTGAAATGAATTAAGCAA832149CATGGCGAAGAAGAAGGAAGAATGCAAGCGAAGCGGCTCTTGAAAAATCC
Ecdyonurus torrentis genome assembly, chromosome: 10.
OX439137.1:2037175-2037194
ACATACGATACGGATAGTGAAAGAAAGGAA2037175CATGGCGAAGAAGAAGGAAGAATGCAAACGAAGCGGCTCTTGAAAAATTC
Ecdyonurus torrentis genome assembly, chromosome: 10.
OX439137.1:5432841-5432860
ACATACGATACGGATAGTGAAAGAAAGCAA5432841CATGGCGAAGAAGAAGGAAGAATGCAAGCGAAGCGGCTCTTGAAAAATTC
Arvicola amphibius genome assembly, chromosome: 11.
LR862391.2:61507351-61507370
CCACGGACTATTATCAGACAGAAAAACCTA61507351CTTCCTTCTTCTTCGCCATGCTTTAAGAGGAAGAAATGCTACTCTCTTTG
Sciaenops ocellatus chromosome 21.
CP136886.1:19966924-19966943
ATTTTACTCGAGAATTTCCATTTTATGTTC19966924CTTCCTTCTTCTTCGCCATGAAGGAAATGCTTTTGAATCTGACAGCAGAA
Falco punctatus genome assembly, chromosome: 1.
OY723433.1:38178541-38178560
GTTTGATTTCAGTATAAATATAACCAGGTA38178541CTTCCTTCTTCTTCGCCATGGTCATATTTGCATTAAATATTCAAGTTTCT
Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari.
AP015036.1:2545394-2545413
ATATCAGGAGCAGCAGCAGCAGCAGCCACG2545394CTTCCTTCTTCTTCGCCATGGCACGATCGAAGCTGAACAAATGGCTTTGG
Wolffia australiana isolate 7733 chromosome 1.
CP092600.1:15840074-15840093
TCCAACACTCTCTTCAGTAGCGGCTTTGGC15840074CTTCCTTCTTCTTCGCCATGGCTTTGCAGCAGCGGTATCTTCGTATCATG
Fragaria x ananassa cultivar Benihoppe chromosome 26.
CP139750.1:7827647-7827666
CGCTAGCCGAGTTTGGAATATCAACCAAGT7827647CTTCCTTCTTCTTCGCCATGGATCCTTCTTCTTTTCTATTCATCCTTCTG
Ectemnius continuus genome assembly, chromosome: 14.
OU342868.1:11060457-11060476
CTTGTGTACCAATCTAGGAGCGTACATTGG11060457CTTCCTTCTTCTTCGCCATGTGTTCAGAGAGCACGGACGTTCTTATACAA
Ecdyonurus torrentis genome assembly, chromosome: 1.
OX439128.1:55531745-55531764
GAATTTTTCAAGAGCCGCTTCGCTTGCATT55531745CTTCCTTCTTCTTCGCCATGTTGCTTTCTTTCACTATCCGTATCGTATGT
Ecdyonurus torrentis genome assembly, chromosome: 2.
OX439129.1:7457230-7457249
GAATTTTTCAAGAGCCGCTTCGCTTGCATG7457230CTTCCTTCTTCTTCGCCATGTTGCTTTCTTTCACTATCCGTATCGTATGT
Ecdyonurus torrentis genome assembly, chromosome: 3.
OX439130.1:37225620-37225639
GGATTTTTCAAGAGCCGCTTCGCTTGCATT37225620CTTCCTTCTTCTTCGCCATGTTGCTTAATTCTTTTCACTATTCGTATGTT
Ecdyonurus torrentis genome assembly, chromosome: 6.
OX439133.1:2171911-2171930
GAATTTTTCAAGAGCCACTTCGCTTGCATG2171911CTTCCTTCTTCTTCGCCATGTTGCTTTCTTTCACTATCCGTATCCGTATC
Ecdyonurus torrentis genome assembly, chromosome: 6.
OX439133.1:35054469-35054488
GAATTTTTCAAGAGCCGCTTCGCTTGCATT35054469CTTCCTTCTTCTTCGCCATGTTGCTTTCTTTCACTATCCGTATCGTATGT
Ecdyonurus torrentis genome assembly, chromosome: 7.
OX439134.1:25579629-25579648
GGATTTTTCAAGAGCCGCTTCGCTTGCATT25579629CTTCCTTCTTCTTCGCCATGTTGCTTTCTTTCACTATCCGTTCCGTATGT
Ecdyonurus torrentis genome assembly, chromosome: 8.
OX439135.1:6696872-6696891
GGATTTTTCAAGAGCCACTTCGCTTGCATG6696872CTTCCTTCTTCTTCGCCATGTTGCTTTCTTTCACTATCCGTATCGTATGT
Ecdyonurus torrentis genome assembly, chromosome: 8.
OX439135.1:17167490-17167509
GAATTTTTCAAGAGCCACTTCGCTTGCATG17167490CTTCCTTCTTCTTCGCCATGTTGCTTTCTTTCACTATCCGTATCGTATGT
Ecdyonurus torrentis genome assembly, chromosome: 8.
OX439135.1:17891054-17891073
GGATTTTTCAAGAGCCGCTTCGCTTGCATT17891054CTTCCTTCTTCTTCGCCATGTTGCTTTCTTTCCCTATCCGTATCGTATGT
Ecdyonurus torrentis genome assembly, chromosome: 10.
OX439137.1:5584866-5584885
GAATTTTTCAAGAGCCGCTTCGCTTGCATT5584866CTTCCTTCTTCTTCGCCATGTTGCTTTCTTTCACTATCCGTATCGTATGT
Ecdyonurus torrentis genome assembly, chromosome: 10.
OX439137.1:10121334-10121353
GGATTTTTCAAGAGCCGCTTCGCTTGCATT10121334CTTCCTTCTTCTTCGCCATGTTGCTTTCTTTCACTATCCGTATCGTATGT
Ecdyonurus torrentis genome assembly, chromosome: 10.
OX439137.1:26469011-26469030
GGATTTTTCAAGAGCCGCTTCGCTTGCATT26469011CTTCCTTCTTCTTCGCCATGTTGCTTAATTCTTTTCACTATTCGTATGTT
Andrena bicolor genome assembly, chromosome: 1.
OY482664.1:47237655-47237674
GTGCCTGTGGCGCCACTTATCGCTGGTCCC47237655CTTCCTTCTTCTTCGCCATGCCAGCAATTTCCTTCGTCACGCTTCTTCAC
Andrena marginata genome assembly, chromosome: 6.
OZ010664.1:11478658-11478677
GTGCCCGTGGTACCTCTAACCGCTGGTCGC11478658CTTCCTTCTTCTTCGCCATGCCAGCAATTTCCTTCGTCACCTTTCTTCAC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CATGGCGAAGAAGAAGGAAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CATGGCGAAGAAGAAGGAAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.527 | 0.518 | search_plus_done; http://172.18.8.135:50400/match?q=CATGGCGAAGAAGAAGGAAG&k=0&no_gap=0&offset=0&limit=50
0.686 | 0.159 | search_minus_done; http://172.18.8.135:50400/match?q=CTTCCTTCTTCTTCGCCATG&k=0&no_gap=0&offset=0&limit=28
0.700 | 0.014 | cgi_end;

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