GGGenome | Results

データベース：

ミスマッチ/ギャップを許容ミスマッチのみ許容：塩基まで (検索する配列長の25%まで)
双方向を検索＋方向のみ検索－方向のみ検索

2025-04-03 11:39:08, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

USDA-FP_119000-603 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-14_A07 5', mRNA sequence.
CF504115.1:205-224

TCTTGATAGCACCTCAGAGATGACACCTCA205CATGGCTGAGCTCCTAAAGCAAGCCTTGGACCTCATGCAACCACAAATCA

USDA-FP_120000-309 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-22_A12 5', mRNA sequence.
CF504818.1:311-330

TCTTGATAGCACCTCAGAGATGACACCTCA311CATGGCTGAGCTCCTAAAGCAAGCCTTGGACCTCATGCAACCACAAATCA

USDA-FP_120000-545 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-25_H01 5', mRNA sequence.
CF505052.1:306-325

TCTTGATAGCACCTCAGAGATGACACCTCA306CATGGCTGAGCTCCTAAAGCAAGCCTTGGACCTCATGCAACCACAAATCA

USDA-FP_122000-957 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-57_G04 5', mRNA sequence.
CF507456.1:305-324

TCTTGATAGCACCTCAGAGATGACACCTCA305CATGGCTGAGCTCCTAAAGCAAGCCTTGGACCTCATGCAACCACAAATCA

USDA-FP_125000-310 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-81_E12 5', mRNA sequence.
CF509802.1:99-118

TCTTGATAGCACCTCAGAGATGACACCTCA99CATGGCTGAGCTCCTAAAGCAAGCCTTGGACCTCATGCAACCACAAATCA

UCRCS02_01M13_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01M13, mRNA sequence.
CF832389.1:324-343

TCTTGATAGCACCTCAGAGATGACACCTCA324CATGGCTGAGCTCCTAAAGCAAGCCTTGGACCTCATGCAACCACAAATCA

CGF1004531_C12 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IIIF_C12 5', mRNA sequence.
CK932639.1:345-364

TCTTGATAGCACCTCAGAGATGACACCTCA345CATGGCTGAGCTCCTAAAGCAAGCCTTGGACCTCATGCAACCACAAATCA

CGF1004287_F03 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IIF_F03 5', mRNA sequence.
CK933271.1:349-368

TCTTGATAGCACCTCAGAGATGACACCTCA349CATGGCTGAGCTCCTAAAGCAAGCCTTGGACCTCATGCAACCACAAATCA

CGF1004286_C09 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IF_C09 5', mRNA sequence.
CK933384.1:367-386

TCTTGATAGCACCTCAGAGATGACACCTCA367CATGGCTGAGCTCCTAAAGCAAGCCTTGGACCTCATGCAACCACAAATCA

CGF1004285_E04 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0003_IVF_E04 5', mRNA sequence.
CK933439.1:76-95

TCTTGATAGCACCTCAGAGATGACACCTCA76CATGGCTGAGCTCCTAAAGCAAGCCTTGGACCTCATGCAACCACAAATCA

UCRCS04_2_029C08_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_029_T3_C08, mRNA sequence.
CV887123.1:322-341

TCTTGATAGCACCTCAGAGATGACACCTCA322CATGGCTGAGCTCCTAAAGCAAGCCTTGGACCTCATGCAACCACAAATCA

UCRCS09_26A03_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-26A03-B5-1-4.b, mRNA sequence.
CX049173.1:325-344

TCTTGATAGCACCTCAGAGATGACACCTCA325CATGGCTGAGCTCCTAAAGCAAGCCTTGGACCTCATGCAACCACAAATCA

Citrus unshiu mRNA, clone: MWYBU54, 5'-end sequence, expressed in whole fruit.
DC894778.1:101-120

TCTTGATAGCACCTCAGAGATGACACCTCA101CATGGCTGAGCTCCTAAAGCAAGCCTTGGACCTCATGCAACCACAAATCA

Citrus unshiu mRNA, clone: MWYEE31, 5'-end sequence, expressed in whole fruit.
DC894854.1:313-332

TCTTGATAGCACCTCAGAGATGACACCTCA313CATGGCTGAGCTCCTAAAGCAAGCCTTGGACCTCATGCAACCACAAATCA

Citrus unshiu mRNA, clone: MWYEK59, 5'-end sequence, expressed in whole fruit.
DC894989.1:351-370

TCTTGATAGCACCTCAGAGATGACACCTCA351CATGGCTGAGCTCCTAAAGCAAGCCTTGGACCTCATGCAACCACAAATCA

Citrus unshiu mRNA, clone: MWYFM25, 5'-end sequence, expressed in whole fruit.
DC895408.1:351-370

TCTTGATAGCACCTCAGAGATGACACCTCA351CATGGCTGAGCTCCTAAAGCAAGCCTTGGACCTCATGCAACCACAAATCA

Citrus unshiu mRNA, clone: MWYG523, 5'-end sequence, expressed in whole fruit.
DC895632.1:342-361

TCTTGATAGCACCTCAGAGATGACACCTCA342CATGGCTGAGCTCCTAAAGCAAGCCTTGGACCTCATGCAACCACAAATCA

IC0AAA10DF02RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY263132.1:323-342

TCTTGATAGCACCTCAGAGATGACACCTCA323CATGGCTGAGCTCCTAAAGCAAGCCTTGGACCTCATGCAACCACAAATCA

IC0AAA21AD02RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY267300.1:69-88

TCTTGATCCCTCCTCAGAGATGACACCTCA69CATGGCTGAGCTCCTAAAGCAAGCCTTGGACCTCATGCAACCACAAATCA

IC0AAA28DD06RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY270113.1:341-360

TCTTGATAGCACCTCAGAGATGACACCTCA341CATGGCTGAGCTCCTAAAGCAAGCCTTGGACCTCATGCAACCACAAATCA

IC0AAA71AC05RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY288956.1:294-313

TCTTGATAGCACCTCAGAGATGACACCTCA294CATGGCTGAGCTCCTAAAGCAAGCCTTGGACCTCATGCAACCACAAATCA

KN0AAH1AC08RM2 PhII-III-Vesicles1 Citrus clementina cDNA 5', mRNA sequence.
DY304896.1:337-356

TCTTGATAGCACCTCAGAGATGACACCTCA337CATGGCTGAGCTCCTAAAGCAAGCCTTGGACCTCATGCAACCACAAATCA

KN0AAH1CH02RM2 PhII-III-Vesicles1 Citrus clementina cDNA 5', mRNA sequence.
DY304986.1:337-356

TCTTGATAGCACCTCAGAGATGACACCTCA337CATGGCTGAGCTCCTAAAGCAAGCCTTGGACCTCATGCAACCACAAATCA

KN0AAH2AB10RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5', mRNA sequence.
DY305038.1:337-356

TCTTGATAGCACCTCAGAGATGACACCTCA337CATGGCTGAGCTCCTAAAGCAAGCCTTGGACCTCATGCAACCACAAATCA

KN0AAH2AD04RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5', mRNA sequence.
DY305048.1:337-356

TCTTGATAGCACCTCAGAGATGACACCTCA337CATGGCTGAGCTCCTAAAGCAAGCCTTGGACCTCATGCAACCACAAATCA

KN0AAH2AD06RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5', mRNA sequence.
DY305049.1:337-356

TCTTGATAGCACCTCAGAGATGACACCTCA337CATGGCTGAGCTCCTAAAGCAAGCCTTGGACCTCATGCAACCACAAATCA

KN0AAH2AF04RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5', mRNA sequence.
DY305058.1:337-356

TCTTGATAGCACCTCAGAGATGACACCTCA337CATGGCTGAGCTCCTAAAGCAAGCCTTGGACCTCATGCAACCACAAATCA

KN0AAH2CA06RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5', mRNA sequence.
DY305118.1:337-356

TCTTGATAGCACCTCAGAGATGACACCTCA337CATGGCTGAGCTCCTAAAGCAAGCCTTGGACCTCATGCAACCACAAATCA

KN0AAH2CA12RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5', mRNA sequence.
DY305122.1:337-356

TCTTGATAGCACCTCAGAGATGACACCTCA337CATGGCTGAGCTCCTAAAGCAAGCCTTGGACCTCATGCAACCACAAATCA

KN0AAH2CD05RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5', mRNA sequence.
DY305138.1:337-356

TCTTGATAGCACCTCAGAGATGACACCTCA337CATGGCTGAGCTCCTAAAGCAAGCCTTGGACCTCATGCAACCACAAATCA

KN0AAH3AG06RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5', mRNA sequence.
DY305270.1:337-356

TCTTGATAGCACCTCAGAGATGACACCTCA337CATGGCTGAGCTCCTAAAGCAAGCCTTGGACCTCATGCAACCACAAATCA

KN0AAH3DD07RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5', mRNA sequence.
DY305412.1:337-356

TCTTGATAGCACCTCAGAGATGACACCTCA337CATGGCTGAGCTCCTAAAGCAAGCCTTGGACCTCATGCAACCACAAATCA

CS00-C1-100-018-C04-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
EY651101.1:356-375

TCTTGATAGCACCTCAGAGATGACACCTCA356CATGGCTGAGCTCCTAAAGCAAGCCTTGGACCTCATGCAACCACAAATCA

CS00-C3-700-024-F12-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
EY694363.1:350-369

TCTTGATAGCACCTCAGAGATGACACCTCA350CATGGCTGAGCTCCTAAAGCAAGCCTTGGACCTCATGCAACCACAAATCA

CS00-C3-700-049-A03-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
EY696573.1:349-368

TCTTGATAGCACCTCAGAGATGACACCTCA349CATGGCTGAGCTCCTAAAGCAAGCCTTGGACCTCATGCAACCACAAATCA

CS00-C3-700-081-C02-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
EY699259.1:371-390

TCTTGATAACACCTCAGAGATGACACCTCA371CATGGCTGAGCTCCTAAAGCAAGCCTTGGACCTCATGCAACCACAAATCA

CS00-C3-700-094-D03-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
EY700418.1:347-366

TCTTGATAGCACCTCAGAGATGACACCTCA347CATGGCTGAGCTCCTAAAGCAAGCCTTGGACCTCATGCAACCACAAATCA

CS00-C3-700-103-D05-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
EY701123.1:354-373

TCTTGATAGCACCTCAGAGATGACACCTCA354CATGGCTGAGCTCCTAAAGCAAGCCTTGGACCTCATGCAACCACAAATCA

CS00-C3-702-058-C02-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
EY715752.1:19-38

CTCAGAGATGACACCTCA19CATGGCTGAGCTCCTAAAGCAAGCCTTGGACCTCATGCAACCACAAATCA

CR05-C3-700-045-B11-CT.F Mandarin fruit, development stadium (1 of 3) Citrus reticulata cDNA, mRNA sequence.
EY783840.1:135-154

TCTTGATAGCACCTCAGAGATGACACCTCA135CATGGCTGAGCTCCTAAAGCAAGCCTTGGACCTCATGCAACCACAAATCA

CR05-C3-700-054-E07-CT.F Mandarin fruit, development stadium (1 of 3) Citrus reticulata cDNA, mRNA sequence.
EY784610.1:339-358

TCTTGATAGCACCTCAGAGATGACACCTCA339CATGGCTGAGCTCCTAAAGCAAGCCTTGGACCTCATGCAACCACAAATCA

CR05-C3-700-069-G11-CT.F Mandarin fruit, development stadium (1 of 3) Citrus reticulata cDNA, mRNA sequence.
EY785844.1:334-353

TCTTGATAGCACCTCAGAGATGACACCTCA334CATGGCTGAGCTCCTAAAGCAAGCCTTGGACCTCATGCAACCACAAATCA

CR05-C3-700-079-F12-CT.F Mandarin fruit, development stadium (1 of 3) Citrus reticulata cDNA, mRNA sequence.
EY786989.1:339-358

TCTTGATAGCACCTCAGAGATGACACCTCA339CATGGCTGAGCTCCTAAAGCAAGCCTTGGACCTCATGCAACCACAAATCA

CR05-C3-700-088-D03-CT.F Mandarin fruit, development stadium (1 of 3) Citrus reticulata cDNA, mRNA sequence.
EY787285.1:352-371

TCTTGATAGCACCTCAGAGATGACACCTCA352CATGGCTGAGCTCCTAAAGCAAGCCTTGGACCTCATGCAACCACAAATCA

CR05-C3-700-138-E10-CT.F Mandarin fruit, development stadium (1 of 3) Citrus reticulata cDNA, mRNA sequence.
EY792095.1:316-335

TCTTGATAGCACCTCAGAGATGACACCTCA316CATGGCTGAGCTCCTAAAGCAAGCCTTGGACCTCATGCAACCACAAATCA

CR05-C3-700-140-A08-CT.F Mandarin fruit, development stadium (1 of 3) Citrus reticulata cDNA, mRNA sequence.
EY792226.1:318-337

TCTTGATAGCACCTCAGAGATGACACCTCA318CATGGCTGAGCTCCTAAAGCAAGCCTTGGACCTCATGCAACCACAAATCA

CR05-C3-700-143-D09-CT.F Mandarin fruit, development stadium (1 of 3) Citrus reticulata cDNA, mRNA sequence.
EY792515.1:303-322

TCTTGATAGCACCTCAGAGATGACACCTCA303CATGGCTGAGCTCCTAAAGCAAGCCTTGGACCTCATGCAACCACAAATCA

CR05-C3-701-019-G10-CT.F Mandarin fruit, development stadium (2 of 3) Citrus reticulata cDNA, mRNA sequence.
EY794511.1:309-328

TCTTGATAGCACCTCAGAGATGACACCTCA309CATGGCTGAGCTCCTAAAGCAAGCCTTGGACCTCATGCAACCACAAATCA

CR05-C3-701-102-A08-CT.F Mandarin fruit, development stadium (2 of 3) Citrus reticulata cDNA, mRNA sequence.
EY801657.1:361-380

TCTTGATAGCACCTCAGAGATGACACCTCA361CATGGCTGAGCTCCTAAAGCAAGCCTTGGACCTCATGCAACCACAAATCA

CG32-C1-003-088-A03-CT.F Mexican lime leaf, greenhouse plant Citrus aurantiifolia cDNA, mRNA sequence.
EY858823.1:325-344

TCTTGATAGCACCTCAGAGATGACACCTCA325CATGGCTGAGCTCCTAAAGCAAGCCTTGGACCTCATGCAACCACAAATCA

Citrus sinensis 1,6 rhamnosyltransferase mRNA, complete cds.
DQ119035.1:312-331

TCTTGATAGCACCTCAGAGATGACACCTCA312CATGGCTGAGCTCCTAAAGCAAGCCTTGGACCTCATGCAACCACAAATCA

Zanthoxylum piperitum cultivar Inerme UDP-glucosyltransferase (GT1) mRNA, complete cds.
MT387147.1:288-307

TATTGACAGCACCTCAGAGATTTCACCTGC288CATGGCTGAGCTCCTAAAGCAAGCCTCAGACCTCATGCAACCACAAATCG

Citrus sinensis genome assembly, chromosome: 6.
OY754323.1:18252476-18252495

TCTTGATAGCACCTCAGAGATGACACCTCA18252476CATGGCTGAGCTCCTAAAGCAAGCCTTGGACCTCATGCAACCACAAATCA

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Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CATGGCTGAGCTCCTAAAGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CATGGCTGAGCTCCTAAAGC | format : html | download : | debug :

0.009 | 0.009 | search_start;
2.515 | 2.506 | search_plus_done; http://172.18.8.135:50400/match?q=CATGGCTGAGCTCCTAAAGC&k=0&no_gap=0&offset=0&limit=50
2.638 | 0.123 | search_minus_done; http://172.18.8.135:50400/match?q=GCTTTAGGAGCTCAGCCATG&k=0&no_gap=0&offset=0&limit=0
2.638 | 0.000 | cgi_end;

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