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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-03-05 18:08:46, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Solanum torvum mRNA, clone: TVR09E11, 5'end, expressed in root at vegetative stage, 2 months after germination.
FS109712.1:466-485
ATGGAGAGAAGAAGCCTTTCTTCGTCCATT466CATGGGGAATTGAATTTTGGAAAAATTTTACCCGCGGCAAAGATATAATT
Gossypium herbaceum isolate Zhongcao1 chromosome 13.
CP106688.1:21165456-21165475
CTTCTATCATTTTTTTGGCCATAGGCATAT21165456CATGGGGAATTGAATTTTGGGTTTTGATGAAGTGGACGTCACCGAACCGT
Pterospermum kingtungense isolate czs-leaf chromosome 13.
CP143067.1:11525573-11525592
CAAGGCCGAAATTCAACATTTCCACCCTTT11525573CATGGGGAATTGAATTTTGGGTTTAACCATGATCAATCGGAATGTTCAAT
Hibiscus tridactylites genome assembly, chromosome: 19.
OY288283.1:8837245-8837264
GGCCTAGGGTAAGACCTTCTGTATGCAGTT8837245CATGGGGAATTGAATTTTGGTGTTCGGTTTGAGGGTAGTTACCAGTAAAC
Hibiscus richardsonii genome assembly, chromosome: 6.
OZ174207.1:54443659-54443678
AGCCTAGGATAAGTCCTTCAGTATGCAGTT54443659CATGGGGAATTGAATTTTGGTGTTCGGTTGGAGGGTAGATAGGTTAAAAT
Hibiscus verdcourtii genome assembly, chromosome: 17.
OZ224456.1:95931858-95931877
GGCCTAGGGTAAGACCTTCTGTATGCAGTT95931858CATGGGGAATTGAATTTTGGTGTTCGGTTGGAGGGTAGTTACCAGTAAAC
Hierochloe odorata genome assembly, chromosome: 7.
OZ243084.1:94960728-94960747
TCCACCAAAAACTACCACATAGTTTCTCAG94960728CATGGGGAATTGAATTTTGGTAATGGGAATTCTAGATCAAACTGGCCCAA
Primula hirsuta genome assembly, chromosome: 21.
OZ272440.1:6989378-6989397
GTGATAAGAAATGGTGGGGGTGGAAATGTG6989378CATGGGGAATTGAATTTTGGGAAGAAGTGAAAGTTGGAGTAATTAAAGAG
Samia ricini White DNA, chromosome 03, sequence.
AP028159.1:4038666-4038685
AGGCAAGCTAGTACGAATGGACTTTTTTTA4038666CATGGGGAATTGAATTTTGGCATCCGTCTACCAGTAATAATCCATATTAT
Samia ricini White GU1 DNA, chromosome 03, complete sequence.
AP038898.1:4086721-4086740
AGGCAAGCTAGTACGAATGGACTTTTTTTA4086721CATGGGGAATTGAATTTTGGCATCCGTCTACCAGTAATAATCCATATTAT
Euthalenessa oculata genome assembly, chromosome: 2.
OZ220385.1:127708437-127708456
ATCTTGAGAAAACCAAATAGGAATCAAACC127708437CATGGGGAATTGAATTTTGGACTTCCCAGGTAACAAATGAGCATTGTGCC
Scardinius erythrophthalmus genome assembly, chromosome: 6.
OZ078839.1:15589359-15589378
CCATCAGTGAGGAAACTGAAGGCCATTGCA15589359CATGGGGAATTGAATTTTGGGAAACCACTTGAAACATTTGTTGAGCTATT
Sciurus vulgaris genome assembly, chromosome: 4.
LR738614.1:14371297-14371316
GTGTTTTAGAAAAAACATAGCTAGTTCATA14371297CCAAAATTCAATTCCCCATGTGTTCTACCTTGAGATAATCATTGTATTCT
Gossypium herbaceum isolate GPA1alz chromosome 13.
CP106700.1:102386450-102386469
ACGGTTCGGTGACGTCCACTTCATCAAAAC102386450CCAAAATTCAATTCCCCATGATATGCCTATGGCCAAAAAAATGATAGAAG
Gossypium hirsutum clone NBRI_GE53791 microsatellite sequence.
JX611589.1:5-24
AAAC5CCAAAATTCAATTCCCCATGATATGCCTATGGCCAAAAAAATGATAGAAG
Frangula alnus genome assembly, chromosome: 8.
OZ066632.1:2675091-2675110
TAGTATATCCTTTCCAGCTGAATAATATTT2675091CCAAAATTCAATTCCCCATGTACTAGCAAACAAAGGTTTGTCCTCTTCAG
Frangula alnus genome assembly, chromosome: 8.
OZ066676.1:2550201-2550220
TAGTATATCCTTTCCAGCTGAATAATATTT2550201CCAAAATTCAATTCCCCATGTACTAGCAAACAAAGGTTTGTCCTCTTCAG
Hibiscus richardsonii genome assembly, chromosome: 8.
OZ174209.1:62090720-62090739
GTTTACTGGTAACTACCCTCCAATCGAACA62090720CCAAAATTCAATTCCCCATGAACTGCATACAGAAGGTCTTACCCTAGGCC
Paenibacillus illinoisensis strain So839b chromosome, complete genome.
CP181317.1:5415938-5415957
TAGATGAGATGACGTACCCCAATGCCGCTG5415938CCAAAATTCAATTCCCCATGAGCCCCTGCATTGGCCTCGTTGTCAATCGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CATGGGGAATTGAATTTTGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CATGGGGAATTGAATTTTGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.325 | 0.316 | search_plus_done; http://172.18.8.135:50900/match?q=CATGGGGAATTGAATTTTGG&k=0&no_gap=0&offset=0&limit=50
0.595 | 0.270 | search_minus_done; http://172.18.8.135:50900/match?q=CCAAAATTCAATTCCCCATG&k=0&no_gap=0&offset=0&limit=38
0.600 | 0.005 | cgi_end;

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