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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-11 19:11:20, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Arachis hypogaea DNA, clone: 8iHA03I18, cultivar: YI-0311.
DE998508.1:81-100
GTACAAAGGTGCACAATAAAAGGGTGCATG81CATGGTGCCGAGTAATTCAATCTTCTACCTACATCGTGAAAAAAAAATCA
Arachis hypogaea cultivar Shitouqi chromosome A05.
CP030987.1:22539306-22539325
ATGTACAAAGGTGCACAATAAAAGTGCATG22539306CATGGTGCCGAGTAATTCAATCTTCTACCTGCATCGTGAAAAAAAAAAAA
Arachis hypogaea cultivar Shitouqi chromosome A06.
CP030988.1:73666645-73666664
GTACAAAGGTGCACAATAAAAGAGTGCATG73666645CATGGTGCCGAGTAATTCAATCTTCTACCTGCATCGTGAAAAAAAAAAAA
Arachis hypogaea cultivar Shitouqi chromosome B08.
CP031000.1:8472024-8472043
GTACAAAGGTGCACAATAAAAGGGTGCATG8472024CATGGTGCCGAGTAATTCAATCTTCTACCTACATCGTGAAAAAAAAATCA
Arachis hypogaea cultivar Shitouqi chromosome B08.
CP031000.1:8510341-8510360
GAACAAAGGTGCACAATAAAAGAGTGCATG8510341CATGGTGCCGAGTAATTCAATTTTCTACTTCAATTTTTGAATCTACCTTT
Arachis hypogaea cultivar Shitouqi chromosome B08.
CP031000.1:8536899-8536918
GAACAAAGGTGCACAATAAAAGAGTGCATG8536899CATGGTGCCGAGTAATTCAATTTTCTACTTCAATTTTTGAATCTACCTTT
Arachis ipaensis cultivar K30076 chromosome 08.
CP049899.1:8972615-8972634
GTACAAAGGTGCACAATAAAAGGGTGCATG8972615CATGGTGCCGAGTAATTCAATCTTCTACCTACATCGTGAAAAAAAAATCA
Arachis ipaensis cultivar K30076 chromosome 08.
CP049899.1:9010926-9010945
GAACAAAGGTGCACAATAAAAGAGTGCATG9010926CATGGTGCCGAGTAATTCAATTTTCTACTTCAATTTTTGAATCTACCTTT
Arachis ipaensis cultivar K30076 chromosome 08.
CP049899.1:9037431-9037450
GAACAAAGGTGCACAATAAAAGAGTGCATG9037431CATGGTGCCGAGTAATTCAATTTTCTACTTCAATTTTGAATCTACCTTTT
Lasiommata megera genome assembly, chromosome: 10.
OV743317.1:17818115-17818134
TTCGCAAATGAAGTAAAACCGGCTGTAGCT17818115CATGGTGCCGAGTAATTCAAAGCAGGCGCTATCACAATGCGCGGTTATGG
Spisula solida genome assembly, chromosome: 10.
OX365953.1:48162072-48162091
TTTCAAAACAAATGTTAGAACACGGTTGTT48162072CATGGTGCCGAGTAATTCAAAACAAACTCGCACAGTTATCAATTTTGGTA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CATGGTGCCGAGTAATTCAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CATGGTGCCGAGTAATTCAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.171 | 0.162 | search_plus_done; http://172.18.8.135:50400/match?q=CATGGTGCCGAGTAATTCAA&k=0&no_gap=0&offset=0&limit=50
0.229 | 0.058 | search_minus_done; http://172.18.8.135:50400/match?q=TTGAATTACTCGGCACCATG&k=0&no_gap=0&offset=0&limit=39
0.229 | 0.000 | cgi_end;

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