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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:24:58, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Schistosoma intercalatum genome assembly, chromosome: Z.
OX103732.1:12855617-12855636
ATTTTGATAAAGTCCGAGGAGATATTGGGA12855617CATGTATCAGGCACACGAACCAAACCCACAAAGAAAACAAAAAGAATGAT
Schistosoma intercalatum genome assembly, chromosome: Z.
OX103883.1:12076552-12076571
ATTTTGATAAAGTCCGAGGAGATATTGGGA12076552CATGTATCAGGCACACGAACCAAACCCACAAAGAAAACAAAAAGAATGAT
Schistosoma mattheei genome assembly, chromosome: Z.
OX103943.1:12842069-12842088
ATTTTGATAAAGTCCGGGGAGATATTGGGA12842069CATGTATCAGGCACACGAACCAAATCCACAAAGAAAACAAAAAGAATGAT
Schistosoma mattheei genome assembly, chromosome: 4.
OX103944.1:41789028-41789047
TTTTGTATAGAGTCCGAGGAGCTTTTGGGA41789028CATGTATCAGGCACACGAACTGAATCCATCAAGACTGAAAAATGATGTAC
Schistosoma bovis genome assembly, chromosome: 4.
OX103956.1:41664154-41664173
TTTTGTATAGAGTCTGAGGAGCTTTTGGGA41664154CATGTATCAGGCACACGAACCAAATCCATCAAGATTGAAAAATGATGCAC
Schistosoma haematobium genome assembly, chromosome: 4.
OX103965.1:44690203-44690222
TTGTGTATAGAGTCCGAGGAGCTTTTGGGA44690203CATGTATCAGGCACACGAACCAAATCCATCAAGATTGAAAAATGATGCAC
Schistosoma haematobium genome assembly, chromosome: Z.
OX103970.1:14413326-14413345
ATTTTGATAAAGTCCGGGGAGATATTGGGA14413326CATGTATCAGGCACACGAACCAAATCCACAAAGAAAACAAAAAGAATGAT
Schistosoma margrebowiei genome assembly, chromosome: Z.
OX104024.1:10817004-10817023
ATTTTGATAGAGTCCGGGGAGATTTTGGGA10817004CATGTATCAGGCACACGAACCAAATCCACAAAGAAAACAAAAAGAATGAT
Schistosoma margrebowiei genome assembly, chromosome: 4.
OX104025.1:42303191-42303210
TTTTGTATAGAGTCCGAGGAGCTTTTGGGA42303191CATGTATCAGGCACACGAACCAAATCCATCAAGATTGAAAAATGATGCAC
Schistosoma haematobium genome assembly, chromosome: 4.
OX104048.1:42243393-42243412
TTGTGTATAGAGTCCGAGGAGCTTTTGGGA42243393CATGTATCAGGCACACGAACCAAATCCATCAAGATTGAAAAATGATGCAC
Schistosoma haematobium genome assembly, chromosome: Z.
OX104053.1:13330240-13330259
ATTTTGATAAAGTCCGGGGAGATATTGGGA13330240CATGTATCAGGCACACGAACCAAATCCACAAAGAAAACAAAAAGAATGAT
Schistosoma bovis genome assembly, chromosome: 4.
OX104097.1:42625755-42625774
TTTTGTATAGAGTCCGAGGAGCTTTTGGGA42625755CATGTATCAGGCACACGAACCAAATCCATCAAGATTGAAAAATGATGCAC
Maratus speciosus genome assembly, chromosome: 13.
OZ010800.1:265313398-265313417
GGGGGGTCAGTGATCGTCTGGCCAAGGCTT265313398CATGTATCAGGCACACGAACTATAATTATTAGTCCTTTGGTTGGTGAGAT
Schistosoma guineensis genome assembly, chromosome: Z.
OX103890.1:11916248-11916267
ATCATTCTTTTTGTTTTCTTTGTGGGTTTG11916248GTTCGTGTGCCTGATACATGTCCCAATACCTCCCCGGACTTTATCAAAAT
Schistosoma mattheei genome assembly, chromosome: Z.
OX103943.1:12829043-12829062
ATCATTCTTTTTGTTTTCTTTGTGGATTTG12829043GTTCGTGTGCCTGATACATGTCCCAATATCTCCCCGGACTTTATCAAAAT
Schistosoma bovis genome assembly, chromosome: Z.
OX103961.1:13547037-13547056
ATCATTCTTTTTGTTTTCTTTGTGGGTTTG13547037GTTCGTGTGCCTGATACATGTCCCAATATCTCCCCGGACTTTATCAAAAT
Schistosoma bovis genome assembly, chromosome: Z.
OX104102.1:13564477-13564496
ATCATTCTTTTTGTTTTCTTTGTGGGTTTG13564477GTTCGTGTGCCTGATACATGTCCCAATATCTCCCCGGACTTTATCAAAAT
Schistosoma curassoni genome assembly, chromosome: Z.
OX104148.1:12964968-12964987
ATCATTCTTTTTGTTTTCTTTGTGGGTTTG12964968GTTCGTGTGCCTGATACATGCCCCAATATCTCCCCGGACTTTATCAAAAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CATGTATCAGGCACACGAAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CATGTATCAGGCACACGAAC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.154 | 0.146 | search_plus_done; http://172.18.8.135:50400/match?q=CATGTATCAGGCACACGAAC&k=0&no_gap=0&offset=0&limit=50
0.260 | 0.106 | search_minus_done; http://172.18.8.135:50400/match?q=GTTCGTGTGCCTGATACATG&k=0&no_gap=0&offset=0&limit=37
0.264 | 0.003 | cgi_end;

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