GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 12:07:22, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

IC0AAA75AF12RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY290355.1:114-133
ATAAATAAAACAAAATCACGCGCGATCACA114CATTAAAATATCCGTGCCGCCTGGCCTGGTGCGATTCTCTCTGTTTCTCT
IC0AAA75AF12RM1 IVIA1 Citrus clementina cDNA clone IC0AAA75AF12, mRNA sequence.
FC885414.1:114-133
ATAAATAAAACAAAATCACGCGCGATCACA114CATTAAAATATCCGTGCCGCCTGGCCTGGTGCGATTCTCTCTGTTTCTCT
Dorcus parallelipipedus genome assembly, chromosome: 3.
OY284477.1:46369520-46369539
CAATCTTCAAATATTCATTAAAGAACCTGA46369520CATTAAAATATCCGTGCCGCCGGGTATCGGGGTTAAATATAGCCCTGCGT
Cryptocephalus primarius genome assembly, chromosome: 9.
OY754945.1:10639798-10639817
TTGCATTTGAGAACATTTTCGCAACATATA10639798GCGGCACGGATATTTTAATGCATAGTTAAGTAACGCGAGATGTAGACTGT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CATTAAAATATCCGTGCCGC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CATTAAAATATCCGTGCCGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.232 | 0.224 | search_plus_done; http://172.18.8.135:50400/match?q=CATTAAAATATCCGTGCCGC&k=0&no_gap=0&offset=0&limit=50
0.262 | 0.029 | search_minus_done; http://172.18.8.135:50400/match?q=GCGGCACGGATATTTTAATG&k=0&no_gap=0&offset=0&limit=47
0.262 | 0.001 | cgi_end;

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