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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 11:46:39, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Malus hybrid cultivar cultivar Flame chromosome 15.
CP141924.1:29341848-29341869
AAATAGAAGCAAATTACAAAGGAAAAATAA29341848CATTAAACACAATCACGATGCATACATTGCACCAACACTCATTGATGGAAGG
Malus hybrid cultivar cultivar Flame chromosome 15.
CP141941.1:32120961-32120982
AAATAGAAGCAAATTACAAAGGAAAAATAA32120961CATTAAACACAATCACGATGCATACATTGGACCAACACAATTGATGGAAGGA
Malus hybrid cultivar cultivar Royalty chromosome 15.
CP141967.1:28656494-28656515
AAATAGAAGCAAATTACAAAGGAAAAATAA28656494CATTAAACACAATCACGATGCATACATTGCACCAACACTCATTGATGGAAGG
Malus hybrid cultivar cultivar Royalty chromosome 15.
CP141984.1:29525162-29525183
AAATAGAAGCAAATTACAAAGGAAAAATAA29525162CATTAAACACAATCACGATGCATACATTGCACCAACACTCATTGATGGAAGG
Malus x robusta genome assembly, chromosome: 1.
OY720325.1:28966143-28966164
AAATAGAAGCAAATTACAAAGGAAAAATAA28966143CATTAAACACAATCACGATGCATACATTGCACCAACACTCATTGATGGAAGG
Crataegus laevigata genome assembly, chromosome: 1.
OY756938.1:28753211-28753232
AAATAGAAGCAAATTACAGAGGAAAAATAA28753211CATTAAACACAATCACGATGCATACATTGCACCAACGCTCATTAATGGAAGG
Crataegus laevigata genome assembly, chromosome: 1.
OY756938.1:28850557-28850578
AAATAGAAGCAAATTACAGAGGAAAAATAA28850557CATTAAACACAATCACGATGCATACATTGCACCAACGCTCATTGATGGAAGG
Crataegus laevigata genome assembly, chromosome: 1.
OY756938.1:28853254-28853275
AAATAGAAGCAAATTACAGAGGAAAAATAA28853254CATTAAACACAATCACGATGCATACATTGCACCAACGCTCATTGATGGAAGG
Mddb5027j14.y1 Mddb Malus domestica cDNA clone Mddb5027j14 5' similar to TR:Q9SZA7 Q9SZA7 HYPOTHETICAL 96.2 KD PROTEIN, mRNA sequence.
CV084347.1:527-548
TCCTTCCATCAATTGTGTTGGTCCAATGTA527TGCATCGTGATTGTGTTTAATGTTATTTTTCCTTTGTAATTTGCTTCTATTT
Malus hybrid cultivar cultivar SH6 chromosome 15.
CP143372.1:24408025-24408046
TCCTTCCATCAATTGTGTTGGTCCAATGTA24408025TGCATCGTGATTGTGTTTAATGTTATTTTTCCTTTGTAATTTGCTTCTATTT
Malus hybrid cultivar cultivar SH6 chromosome 15.
CP143389.1:21565641-21565662
CCTTCCATCAATGAGTGTTGGTGCAATGTA21565641TGCATCGTGATTGTGTTTAATGTTATTTTTCCTTTGTAATTTACTTCTATTT
Malus sylvestris genome assembly, chromosome: 15.
OU696517.1:24064426-24064447
TCCTTCCATCAATTGTGTTGGTCCAATGTA24064426TGCATCGTGATTGTGTTTAATGTTATTTTTCCTTTGTAATTTGCTTCTATTT
Malus domestica genome assembly, chromosome: 15.
OU696691.1:24338259-24338280
CCTTCCATCAATGAGTGTTGGTGCAATGTA24338259TGCATCGTGATTGTGTTTAATGTTATTTTTCCTTTGTAATTTGCTTCTATTT
Malus domestica genome assembly, chromosome: 15.
OU696691.1:24394865-24394886
TCCTTCCATCAATTGTGTTGGTCCAATGTA24394865TGCATCGTGATTGTGTTTAATGTTATTTTTCCTTTGTAATTTGCTTCTATTT
Malus domestica genome assembly, chromosome: 15.
OU744556.1:24244345-24244366
TCCTTCCATCAATTGTGTTGGTCCAATGTA24244345TGCATCGTGATTGTGTTTAATGTTATTTTTCCTTTGTAATTTGCTTCTATTT
Malus domestica genome assembly, chromosome: 15.
OU744967.1:24264097-24264118
CCTTCCATCAATGAGTGTTGGTGCAATGTA24264097TGCATCGTGATTGTGTTTAATGTTATTTTTCCTTTGTAATTTGCTTCTATTT
Malus domestica genome assembly, chromosome: 15.
OU744967.1:24320705-24320726
TCCTTCCATCAATTGTGTTGGTCCAATGTA24320705TGCATCGTGATTGTGTTTAATGTTATTTTTCCTTTGTAATTTGCTTCTATTT
Malus domestica genome assembly, chromosome: 15.
OU745005.1:24177499-24177520
TCCTTCCATCAATTGTGTTGGTCCAATGTA24177499TGCATCGTGATTGTGTTTAATGTTATTTTTCCTTTGTAATTTGCTTCTATTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CATTAAACACAATCACGATGCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CATTAAACACAATCACGATGCA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.168 | 0.159 | search_plus_done; http://172.18.8.135:50400/match?q=CATTAAACACAATCACGATGCA&k=0&no_gap=0&offset=0&limit=50
0.306 | 0.138 | search_minus_done; http://172.18.8.135:50400/match?q=TGCATCGTGATTGTGTTTAATG&k=0&no_gap=0&offset=0&limit=42
0.313 | 0.007 | cgi_end;

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