GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 06:02:18, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Arachis hypogaea cultivar Shitouqi chromosome A03.
CP030985.1:56873975-56873994
GTATTGTGATTCATTCTCTAAGATCCAAAA56873975CATTAGTGCTGGTGGTCGTGGTTGGCCTATCAACTCGGAGTCGCACCATT
Arachis hypogaea cultivar Shitouqi chromosome B01.
CP030993.1:86050733-86050752
GTATTATGATTCGTTCTCTAAGATCCAAAA86050733CATTAGTGCTGGTGGTCGTGGTTGGCCCATCAACTCAAGGCCGCACCATG
Arachis hypogaea cultivar Shitouqi chromosome B03.
CP030995.1:51539117-51539136
GTATTGCGATTCGTTCTCTAAGATCCAAAA51539117CATTAGTGCTGGTGGTCGTGGTTGGCCCATCAACTCGAGGTCGCACCATG
Arachis hypogaea cultivar Shitouqi chromosome B05.
CP030997.1:28513525-28513544
AGTATTGTGATTCATTCTCTAAGATCCAAA28513525CATTAGTGCTGGTGGTCGTGGTTGGCCCATCAACTCGAGGTCGCACCATG
Arachis ipaensis cultivar K30076 chromosome 01.
CP049892.1:86424265-86424284
GTATTATGATTCGTTCTCTAAGATCCAAAA86424265CATTAGTGCTGGTGGTCGTGGTTGGCCCATCAACTCAAGGCCGCACCATG
Arachis ipaensis cultivar K30076 chromosome 03.
CP049894.1:52343043-52343062
GTATTGCGATTCGTTCTCTAAGATCCAAAA52343043CATTAGTGCTGGTGGTCGTGGTTGGCCCATCAACTCGAGGTCGCACCATG
Arachis ipaensis cultivar K30076 chromosome 05.
CP049896.1:35149761-35149780
AGTATTGTGATTCATTCTCTAAGATCCAAA35149761CATTAGTGCTGGTGGTCGTGGTTGGCCCATCAACTCGAGGTCGCACCATG
Arachis ipaensis cultivar K30076 chromosome 09.
CP049900.1:65054689-65054708
GTATTATGATTTGTTCTCTAAGATCCAAAA65054689CATTAGTGCTGGTGGTCGTGGTTGGCCCATCAACTCGGGGTCGCACCATG
Arachis hypogaea cultivar Shitouqi chromosome B06.
CP030998.1:134375812-134375831
CATGGTGCGACCTCAAGTTGATGGTCCAAC134375812CACGACCACCAGCACTAATGTTTTGGATCTTAGAGAACAAATCGCAATAC
Arachis hypogaea cultivar Shitouqi chromosome B09.
CP031001.1:68006227-68006246
CATGGTGCGACCCCGAGTTGATGGGCCAAC68006227CACGACCACCAGCACTAATGTTTTGGATCTTAGAGAACAAATCATAATAC
Arachis ipaensis cultivar K30076 chromosome 06.
CP049897.1:133315006-133315025
CATGGTGCGACCTCAAGTTGATGGTCCAAC133315006CACGACCACCAGCACTAATGTTTTGGATCTTAGAGAACAAATCGCAATAC
Sepiola atlantica genome assembly, chromosome: 15.
OY744529.1:74930446-74930465
ATAGACACCCCGCAATATTAGTGTAACTCC74930446CACGACCACCAGCACTAATGTTAACATTAATACCAATATTGTATTTCTCG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CATTAGTGCTGGTGGTCGTG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CATTAGTGCTGGTGGTCGTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.112 | 0.103 | search_plus_done; http://172.18.8.135:50400/match?q=CATTAGTGCTGGTGGTCGTG&k=0&no_gap=0&offset=0&limit=50
0.145 | 0.033 | search_minus_done; http://172.18.8.135:50400/match?q=CACGACCACCAGCACTAATG&k=0&no_gap=0&offset=0&limit=42
0.147 | 0.003 | cgi_end;

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