GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 18:47:18, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sequence 13 from patent US 6593084.
AR353574.1:1-30
1CATTATGCTGAGTGATATCTTTTTTTTTAG
Sequence 39 from Patent WO0240666.
AX431406.1:1-30
1CATTATGCTGAGTGATATCTTTTTTTTTAG
JP 2002515754-A/4: Method for identifying translationally regulated genes.
BD195188.1:1-30
1CATTATGCTGAGTGATATCTTTTTTTTTAG
JP 2004512852-A/30: Fat Regulated Genes, Uses Thereof, and Compounds for Modulating Same.
DD010092.1:1-30
1CATTATGCTGAGTGATATCTTTTTTTTTAG
JP 2003235570-A/13: Polypeptide having interaction with hibernation-specific protein and its utilization.
DJ389561.1:1-30
1CATTATGCTGAGTGATATCTTTTTTTTTAG
Sequence 21 from patent US 8349562.
GZ703058.1:1-30
1CATTATGCTGAGTGATATCTTTTTTTTTAG
Sequence 21 from patent US 9109258.
HL076170.1:1-30
1CATTATGCTGAGTGATATCTTTTTTTTTAG
WO 1998045431-A/19: Cancer metastasis-associated gene.
HV447458.1:1-30
1CATTATGCTGAGTGATATCTTTTTTTTTAG
PE39 Avicennia marina leaf cDNA Library Avicennia marina cDNA similar to fused-ccdB (Escherichia coli), mRNA sequence.
CD777460.1:67-96
AACGGCCGCCAGTGTGCTGGAATTCGGCTT67CATTATGCTGAGTGATATCTTTTTTTTTAGCTCTAATATATTTATAAAGACCCACAACGT
EST0032 Brassica juncea leaf disc explants Brassica juncea cDNA, mRNA sequence.
CK991359.1:17-46
GAATTCACTAGTGATT17CATTATGCTGAGTGATATCTTTTTTTTTAGCCCCAAAGTTCTTTATTTTTAAAAACTGGT
EST0072 Brassica juncea leaf disc explants Brassica juncea cDNA, mRNA sequence.
CK991361.1:19-48
GCGAATTCACTAGTGATT19CATTATGCTGAGTGATATCTTTTTTTTTAGAGAAAATAGTCTTTTTAATTTAATAGAGAA
EST0193 Brassica juncea leaf disc explants Brassica juncea cDNA, mRNA sequence.
CK991378.1:16-45
AATTCACTAGTGATT16CATTATGCTGAGTGATATCTTTTTTTTTAGCCTTAGATCTGAAATTCATATAACGTTGAT
EST0911 Brassica juncea leaf disc explants Brassica juncea cDNA, mRNA sequence.
CK991436.1:16-45
AATTCACTAGTGATT16CATTATGCTGAGTGATATCTTTTTTTTTAGCCATGTGATTGCTTTATTTTGATATATAAT
EST0921 Brassica juncea leaf disc explants Brassica juncea cDNA, mRNA sequence.
CK991437.1:18-47
CGAATTCACTAGTGATT18CATTATGCTGAGTGATATCTTTTTTTTTAGATTCGACAAGAGACAGAAGTCGAAGCTAAA
EST0931 Brassica juncea leaf disc explants Brassica juncea cDNA, mRNA sequence.
CK991438.1:15-44
ATTCACTAGTGATT15CATTATGCTGAGTGATATCTTTTTTTTTAGAGGAAATACTTTGGACATTACGAAAGTGAA
54-20 Normalized cDNA from Longissimus Dorsi muscle and backfat tissues of pigs Sus scrofa cDNA 3', mRNA sequence.
CN605625.1:5-34
GATT5CATTATGCTGAGTGATATCTTTTTTTTTAGGGATGTCTGTTTTTATTTTATTTATTCCTT
54-21 Normalized cDNA from Longissimus Dorsi muscle and backfat tissues of pigs Sus scrofa cDNA 3', mRNA sequence.
CN605626.1:6-35
CGATT6CATTATGCTGAGTGATATCTTTTTTTTTAGGAAAATCAGCTCAATTGCCATTATTGAATC
54-42 Normalized cDNA from Longissimus Dorsi muscle and backfat tissues of pigs Sus scrofa cDNA 3', mRNA sequence.
CN605647.1:1-30
1CATTATGCTGAGTGATATCTTTTTTTTTAGCTTCTGTGTAAATATGGCCCTTTTCATTTG
54-44 Normalized cDNA from Longissimus Dorsi muscle and backfat tissues of pigs Sus scrofa cDNA 3', mRNA sequence.
CN605649.1:1-30
1CATTATGCTGAGTGATATCTTTTTTTTTAGTGGTATCTTTGCTAGTTTTGGTATTAGGGT
BO2 Durum wheat leaf tissue Triticum turgidum subsp. durum cDNA clone BO2, mRNA sequence.
EC907724.1:11-40
GAATTCGATT11CATTATGCTGAGTGATATCTTTTTTTTTAGAACGAAGGCTCGCGGAGAGCCCGGCTTTGA
BO4 Durum wheat leaf tissue Triticum turgidum subsp. durum cDNA clone BO4, mRNA sequence.
EC907725.1:11-40
GAATTCGATT11CATTATGCTGAGTGATATCTTTTTTTTTAGCCGATCTTAGTATTGGTGTTTTTTATGGAT
BO5 Durum wheat leaf tissue Triticum turgidum subsp. durum cDNA clone BO5, mRNA sequence.
EC907726.1:11-40
GAATTCGATT11CATTATGCTGAGTGATATCTTTTTTTTTAGGGGGAAAATAGTCGTATGTCTAGTACCACT
BO9 Durum wheat leaf tissue Triticum turgidum subsp. durum cDNA clone BO9, mRNA sequence.
EC907729.1:11-40
GAATTCGATT11CATTATGCTGAGTGATATCTTTTTTTTTAGTTCTGTTGCCTTGAGTGACTTATATGTTGT
BO11 Durum wheat leaf tissue Triticum turgidum subsp. durum cDNA clone BO11, mRNA sequence.
EC907731.1:11-40
GAATTCGATT11CATTATGCTGAGTGATATCTTTTTTTTTAGTAGATTATTGCATAGTATTCTTTTTCACTT
BO3 Durum wheat leaf tissue Triticum turgidum subsp. durum cDNA clone BO3, mRNA sequence.
EC997082.1:11-40
GAATTCGATT11CATTATGCTGAGTGATATCTTTTTTTTTAGAATCGATGAGCTTTTAGAATTCATGAACTA
Gp-DD3_B82 Gypsophila perfoliata DDRT-PCR clone Gypsophila perfoliata cDNA, mRNA sequence.
FE905344.1:154-183
GACGGTGCTTTAGTGAGGGTTAATAGTGAT154CATTATGCTGAGTGATATCTTTTTTTTTAGGACGGTGCTTTAGTGAGGGTTAATATCGCT
Gp-DD3_B82 Gypsophila perfoliata DDRT-PCR clone Gypsophila perfoliata cDNA, mRNA sequence.
FE905344.1:270-299
TTGGGACGGTGCTTTGTGAGGGTTAATATT270CATTATGCTGAGTGATATCTTTTTTTTTAGGACGGTGCTTTAGTGAGGGTTAATATCACT
JZS119d chicken breast blister (keel cyst) related genes Gallus gallus cDNA clone JZS119 5', mRNA sequence.
GW317169.1:1-30
1CATTATGCTGAGTGATATCTTTTTTTTTAGAGGAAGAAAATATGCAACAAGTTTTACTCA
Sequence 107 from Patent WO2006075084.
CS359768.1:1442-1471
AATACACTACCACTAACTATAGCTGATGAG1442CTAAAAAAAAAGATATCACTCAGCATAATGAATCACTAGTGAATTCGCGGCCGCGTCGAC
54-5 Normalized cDNA from Longissimus Dorsi muscle and backfat tissues of pigs Sus scrofa cDNA 3', mRNA sequence.
CN605610.1:198-227
GCTGACTTCAATTTGTCCAGCGTTTATTTT198CTAAAAAAAAAGATATCACTCAGCATAATG
54-8 Normalized cDNA from Longissimus Dorsi muscle and backfat tissues of pigs Sus scrofa cDNA 3', mRNA sequence.
CN605613.1:253-282
CATGTATCAGATACTGTACAGATATGGCTA253CTAAAAAAAAAGATATCACTCAGCATAATGAATC
54-9 Normalized cDNA from Longissimus Dorsi muscle and backfat tissues of pigs Sus scrofa cDNA 3', mRNA sequence.
CN605614.1:225-254
TTGGGAACTTCCATATGCTGTGGTGCAGTC225CTAAAAAAAAAGATATCACTCAGCATAATGAATC
54-16 Normalized cDNA from Longissimus Dorsi muscle and backfat tissues of pigs Sus scrofa cDNA 3', mRNA sequence.
CN605621.1:175-204
ATCTGCCTGGAAGCAATGTTTGTTTCCCAT175CTAAAAAAAAAGATATCACTCAGCATAATG
54-23 Normalized cDNA from Longissimus Dorsi muscle and backfat tissues of pigs Sus scrofa cDNA 3', mRNA sequence.
CN605628.1:149-178
CTCCTGAGTATATATTCAGACAAAATTATA149CTAAAAAAAAAGATATCACTCAGCATAATGAATCT
54-24 Normalized cDNA from Longissimus Dorsi muscle and backfat tissues of pigs Sus scrofa cDNA 3', mRNA sequence.
CN605629.1:142-171
TCACCTTGTCTTATTCCTATAGGCTCATCT142CTAAAAAAAAAGATATCACTCAGCATAATG
54-25 Normalized cDNA from Longissimus Dorsi muscle and backfat tissues of pigs Sus scrofa cDNA 3', mRNA sequence.
CN605630.1:148-177
TGGTTGTCAGAGGGGAGAGGAAGGCGAGGA148CTAAAAAAAAAGATATCACTCAGCATAATGAATC
54-26 Normalized cDNA from Longissimus Dorsi muscle and backfat tissues of pigs Sus scrofa cDNA 3', mRNA sequence.
CN605631.1:253-282
CATGTATCAGATACTGTACAGATATGGCTA253CTAAAAAAAAAGATATCACTCAGCATAATG
54-27 Normalized cDNA from Longissimus Dorsi muscle and backfat tissues of pigs Sus scrofa cDNA 3', mRNA sequence.
CN605632.1:192-221
ACACAGTATGGTATCACTTACATGTGGAAT192CTAAAAAAAAAGATATCACTCAGCATAATG
54-35 Normalized cDNA from Longissimus Dorsi muscle and backfat tissues of pigs Sus scrofa cDNA 3', mRNA sequence.
CN605640.1:101-130
CAGCAACATATTGAAAGGGTGGTGCTGGTT101CTAAAAAAAAAGATATCACTCAGCATAATG
54-40 Normalized cDNA from Longissimus Dorsi muscle and backfat tissues of pigs Sus scrofa cDNA 3', mRNA sequence.
CN605645.1:156-185
ATCTCTATTCTGTATTTCCTTACCTACTTC156CTAAAAAAAAAGATATCACTCAGCATAATGAATC
54-45 Normalized cDNA from Longissimus Dorsi muscle and backfat tissues of pigs Sus scrofa cDNA 3', mRNA sequence.
CN605650.1:93-122
GGAGCTTAAAACAGAATGGAGCACCTGCTT93CTAAAAAAAAAGATATCACTCAGCATAATG
54-51 Normalized cDNA from Longissimus Dorsi muscle and backfat tissues of pigs Sus scrofa cDNA 3', mRNA sequence.
CN605656.1:135-164
AAGGAATAAATAAAATAAAAACAGACATCC135CTAAAAAAAAAGATATCACTCAGCATAATG
54-52 Normalized cDNA from Longissimus Dorsi muscle and backfat tissues of pigs Sus scrofa cDNA 3', mRNA sequence.
CN605657.1:143-172
TGGGAACCTCCATATGCCGAAGATGTGGCC143CTAAAAAAAAAGATATCACTCAGCATAATGA
54-53 Normalized cDNA from Longissimus Dorsi muscle and backfat tissues of pigs Sus scrofa cDNA 3', mRNA sequence.
CN605658.1:147-176
CTCCTGAGTATATATTCAGACAAAATTATA147CTAAAAAAAAAGATATCACTCAGCATAATG
DD11-39 Tobacco ESTs characterized by a hypersensitive response specific pattern of expression library Nicotiana tabacum cDNA clone DD11-39 similar to C3HC4-type RING domain containing protein (RDCP1)
CV507095.1:438-467
CTTTGTATTATTATGCTGACTGAGTTAAAG438CTAAAAAAAAAGATATCACTCAGCATAATG
DD-L17-3B Sugar Beet differential display cDNA Beta vulgaris cDNA similar to Probable zinc-finger protein, mRNA sequence.
CX779651.1:512-541
CAAAACAATTATCTAATTATATGTCTTTGC512CTAAAAAAAAAGATATCACTCAGCATAATG
BO10 Durum wheat leaf tissue Triticum turgidum subsp. durum cDNA clone BO10, mRNA sequence.
EC907730.1:169-198
ATGGTGAATATGTGGACTCGTGTGCGCCAC169CTAAAAAAAAAGATATCACTCAGCATAATGAATCACTAGTGAATTC
Dendrobium grex Madame Thong-IN putative copper/zinc superoxide dismutase copper chaperone (ovg23) mRNA, partial cds.
AF100330.1:357-386
CAAGAATTGAAGCAAGCTTCAGTGGTTTGT357CTAAAAAAAAAGATATCACTCAGCATAATG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CATTATGCTGAGTGATATCTTTTTTTTTAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CATTATGCTGAGTGATATCTTTTTTTTTAG | format : html | download : | debug : 

0.014 | 0.014 | search_start;
1.160 | 1.146 | search_plus_done; http://172.18.8.135:50400/match?q=CATTATGCTGAGTGATATCTTTTTTTTTAG&k=0&no_gap=0&offset=0&limit=50
1.748 | 0.588 | search_minus_done; http://172.18.8.135:50400/match?q=CTAAAAAAAAAGATATCACTCAGCATAATG&k=0&no_gap=0&offset=0&limit=22
1.772 | 0.023 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).