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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 12:30:26, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Trifolium pratense cDNA clone:RCC11176.
BB937982.1:64-86
TTCTTCTTCTTCAACATTCATTCATTCATT64CATTCATTGCATTGTTTCTTCAATTGATAGATGGTTGAAGAGATTAAGGGACA
Trifolium repens isolate ACLI19 chromosome 07_0cc.
CP125848.1:551498-551520
TTTTCACTATCTTCTTTCTTCTTCAACATT551498CATTCATTGCATTGTTTCTTCAAGTAAGATATTTTTTTTTTATTCTTTTCTAT
Trifolium repens isolate ACLI19 chromosome 07_Pall.
CP125849.1:558824-558846
TTTTCACTATCTTCTCTCTTCTTCAACATT558824CATTCATTGCATTGTTTCTTCAAGTAAGATATTTTTTTTTATTCTTTTTATAT
Trifolium fragiferum genome assembly, chromosome: 5.
OX940793.1:816537-816559
TTTCACTATCTTTCTCTCTTCTTCAACATT816537CATTCATTGCATTGTTTCTTCAAGTAAGATATTTTTTTTTATTTCTTTTTTTA
Trifolium fragiferum genome assembly, chromosome: 5.
OX940793.1:819976-819998
TTTCACTATCTTTCTCTCTTCTTCAACATT819976CATTCATTGCATTGTTTCTTCAAGTAAGATATTCTTTTCTTTTTTATTTCTTT
Trifolium subterraneum genome assembly, chromosome: 4.
OX637464.1:58492409-58492431
ATATAAAAGAATAAATAAAAAATATCTTAC58492409TTGAAGAAACAATGCAATGAATGTTGAAGAGAGAAAGATAGTGAAAAGAAAGA
Anorthoa munda genome assembly, chromosome: 16.
OX243909.1:31205486-31205508
AGGACATTTACATCATAACAAAAAGCATGT31205486TTGAAGAAACAATGCAATGAATGAATCAACTACGAAACAAGTTGATAAACGAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CATTCATTGCATTGTTTCTTCAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CATTCATTGCATTGTTTCTTCAA | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.175 | 0.166 | search_plus_done; http://172.18.8.135:50400/match?q=CATTCATTGCATTGTTTCTTCAA&k=0&no_gap=0&offset=0&limit=50
0.266 | 0.092 | search_minus_done; http://172.18.8.135:50400/match?q=TTGAAGAAACAATGCAATGAATG&k=0&no_gap=0&offset=0&limit=45
0.268 | 0.002 | cgi_end;

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