GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-19 11:09:36, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lotus japonicus genomic DNA, chromosome 2, clone: LjT47E17, TM1773.
AP009711.1:92215-92233
ACCAGTGTGTTATGAAGTATACATAGATAT92215CATTCGCAGGTGCTTAAAGCTT
Lotus japonicus B-129 DNA, chromosome 2, complete sequence.
AP022630.1:75745991-75746009
ACCAGTGTGTTATGAAGTATACATAGATAT75745991CATTCGCAGGTGCTTAAAGCTTGAAGCAAATGAGCGACCAACAATGGGC
Lotus japonicus B-129 DNA, chromosome 2, complete sequence.
AP022630.1:75757709-75757727
ACCAGTGTGTTATGAAGTATACATAGATAT75757709CATTCGCAGGTGCTTAAAGCTTGAAGCAAATGAGCGACCAACAATGGGC
Lotus japonicus B-129 DNA, chromosome 2, complete sequence.
AP022630.1:75785328-75785346
ACCAGTGTGTTATGAAGTATACATAGATAT75785328CATTCGCAGGTGCTTAAAGCTTGAAGCAAATGAGCGACCAACAATGGGC
Lotus japonicus clone JCVI-FLLj-19M7 unknown mRNA.
BT144220.1:236-254
ACCAGTGTGTTATGAAGTATACATAGATAT236CATTCGCAGGTGCTTAAAGCTTGAAGCAAATGAGCGACCAACAATGGGC
Maratus michaelseni genome assembly, chromosome: 3.
OZ007589.1:433973600-433973618
CTCGTTCGCTGTCGTAAATCGGGTTCTGGG433973600CATTCGCAGGTGCTTAAAGCCGGCTCTCAAAGAAAAAAGATAAGTTATT
Lotus japonicus cDNA clone:MPD055g02_f, 3' end.
AV773706.1:307-325
GCCCATGGTTGGTCGCTCATTTGCTTCAAG307CTTTAAGCACCTGCGAATGATATCTATGTATACTTCATAAGAGACGGGT
Lotus japonicus mRNA, clone: GNr059f03, 5' end sequence.
DC595444.1:329-347
GCCCATTGTTGGTCGCTCATTTGCTTCAAG329CTTTAAGCACCTGCGAATGATATCTATGTATA
Lotus japonicus cDNA, clone: LjFL3-022-DG11.r0, 3'-end sequence.
FS352145.1:332-350
GCCCATTGTTGGTCGCTCATTTGCTTCAAG332CTTTAAGCACCTGCGAATGATATCTATGTATACTTCATAACACACTGGT
Lotus japonicus cDNA, clone: LjFL3-036-CD08.r0, 3'-end sequence.
FS356485.1:345-363
GCCCATTGTTGGTCGCTCATTTGCTTCAAG345CTTTAAGCACCTGCGAATGATATCTATGTATACTTCATAACACACTGGT
LJMAM51TO JCVI-LJ2 Lotus japonicus cDNA 3', mRNA sequence.
GO028334.1:235-253
GCCCATTGTTGGTCGCTCATTTGCTTCAAG235CTTTAAGCACCTGCGAATGATATCTATGTATACTTCATAACACACTGGT
LJNB702TO JCVI-LJ3 Lotus japonicus cDNA 3', mRNA sequence.
GO040866.1:92-110
GCCCATTGTTGGTCGCTCATTTGCTTCAAG92CTTTAAGCACCTGCGAATGATATCTATGTATACTTCATAACACACTGGT
Lotus japonicus DNA, clone:LjT47e17_not.
AG259014.1:1-19
1CTTTAAGCACCTGCGAATGATATCTATGTATACTTCATAACACACTGGT
Marthasterias glacialis genome assembly, chromosome: 4.
OU452222.1:16299583-16299601
ACGCTCAGATGCAGTCAGGTTGTCTGTGCT16299583CTTTAAGCACCTGCGAATGCCAACGTAACACCACCGTGTAGATATGAAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CATTCGCAGGTGCTTAAAG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CATTCGCAGGTGCTTAAAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.095 | 0.085 | search_plus_done; http://172.18.8.135:50400/match?q=CATTCGCAGGTGCTTAAAG&k=0&no_gap=0&offset=0&limit=50
0.923 | 0.829 | search_minus_done; http://172.18.8.135:50400/match?q=CTTTAAGCACCTGCGAATG&k=0&no_gap=0&offset=0&limit=44
0.929 | 0.006 | cgi_end;

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