GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:04:24, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Malus hybrid cultivar cultivar Flame chromosome 11.
CP141937.1:2310529-2310548
ATTCGTTAACTATTCTACATCAGACTATTG2310529CATTGATGCTCAGACGCTACTTTCTAGGAAGAGTGCAAGGGTTGTAATTC
Malus hybrid cultivar cultivar Flame chromosome 11.
CP141937.1:2332694-2332713
ATTCGTTAACTATTCTACATCAGACTATTG2332694CATTGATGCTCAGACGCTACTTTCTAGGAAGAGTGCAAGGGTTGTAATTC
Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141963.1:2427789-2427808
ATTCGTTAACTATTCTACATCAGACTATTG2427789CATTGATGCTCAGACGCTACTTTCTAGGAAGAGTGCAAGGGTTGTAATTC
Malus domestica genome assembly, chromosome: 11.
OU696687.1:2485270-2485289
ATTCGTTAACTATTCTACATCAGACTATTG2485270CATTGATGCTCAGACGCTACTTTCTAGGAAGAGTGCAAGGGTTGTAATTC
Malus domestica genome assembly, chromosome: 11.
OU744552.1:2540989-2541008
ATTCGTTAACTATTCTACATCAGACTATTG2540989CATTGATGCTCAGACGCTACTTTCTAGGAAGAGTGCAAGGGTTGTAATTC
Malus domestica genome assembly, chromosome: 11.
OU744963.1:2576586-2576605
ATTCGTTAACTATTCTACATCAGACTATTG2576586CATTGATGCTCAGACGCTACTTTCTAGGAAGAGTGCAAGGGTTGTAATTC
Malus domestica genome assembly, chromosome: 11.
OU745001.1:2540126-2540145
ATTCGTTAACTATTCTACATCAGACTATTG2540126CATTGATGCTCAGACGCTACTTTCTAGGAAGAGTGCAAGGGTTGTAATTC
Platycnemis pennipes genome assembly, chromosome: 2.
OW121848.1:149008721-149008740
TTCTGAATGAAGTTTAAAGGCAGTTCACAG149008721GTAGCGTCTGAGCATCAATGGCGAACGACCTACCCGTCGACTGGGGGACA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CATTGATGCTCAGACGCTAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CATTGATGCTCAGACGCTAC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.344 | 0.336 | search_plus_done; http://172.18.8.135:50400/match?q=CATTGATGCTCAGACGCTAC&k=0&no_gap=0&offset=0&limit=50
0.444 | 0.100 | search_minus_done; http://172.18.8.135:50400/match?q=GTAGCGTCTGAGCATCAATG&k=0&no_gap=0&offset=0&limit=43
0.445 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).