GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-12-18 18:30:18, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

UFL_139_94 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence.
ES847053.1:778-801
CTGCAATCATCAAGAAACGCAAAATGGTTT778CATTTAAAGCCTCATCAACACCTCTAAAAGTCATCAAGGAACCAGCCTCCCTGT
Cucumis melo isolate PI 511890 chromosome 9.
CP136112.1:7881386-7881409
CTTTGCAGTCATTATTAATACAAACTGTTT7881386CATTTAAAGCCTCATCAACACCTCTGGAATCATCTAGTAACAGCCTCCTATTTA
TSA: Cucumis sativus var. sativus cultivar Vlaspik CuSa200910_6037, mRNA sequence.
JW924205.1:689-712
TTCACAGGAGGCTGTTACTAGATGATTCCA689GAGGTGTTGATGAGGCTTTAAATGAAACAGTTTGTGTTAATAATGACTGCAAAG
Cucumis melo a-mannosidase mRNA, complete cds.
KC416305.1:2547-2570
TTCACAGGAGGCTGTTACTAGATGATTCCA2547GAGGTGTTGATGAGGCTTTAAATGAAACAGTTTGTATTAATAATGACTGCAAAG
Cucumis melo genomic scaffold, anchoredscaffold00005.
LN681895.1:744803-744826
TAAATAGGAGGCTGTTACTAGATGATTCCA744803GAGGTGTTGATGAGGCTTTAAATGAAACAGTTTGTATTAATAATGACTGCAAAG
Cucumis melo genomic chromosome, chr_9.
LN713263.1:16086000-16086023
TAAATAGGAGGCTGTTACTAGATGATTCCA16086000GAGGTGTTGATGAGGCTTTAAATGAAACAGTTTGTATTAATAATGACTGCAAAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CATTTAAAGCCTCATCAACACCTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CATTTAAAGCCTCATCAACACCTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.250 | 0.241 | search_plus_done; http://172.18.8.135:50800/match?q=CATTTAAAGCCTCATCAACACCTC&k=0&no_gap=0&offset=0&limit=50
0.362 | 0.113 | search_minus_done; http://172.18.8.135:50800/match?q=GAGGTGTTGATGAGGCTTTAAATG&k=0&no_gap=0&offset=0&limit=48
0.365 | 0.003 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).