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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-04 11:47:29, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Canis lupus familiaris breed Labrador retriever chromosome 14a.
CP050589.1:47692135-47692154
CACCTAAATGCAAACGGTAAGATGGGAAGT47692135CATTTCCCATAGCCTCCAAAAATAATAATAACAATAATAATAATAATAAT
Canis lupus familiaris breed Labrador retriever chromosome 14b.
CP050623.1:47686729-47686748
CACCTAAATGCAAACGGTAAGATGGGAAGT47686729CATTTCCCATAGCCTCCAAAAATAATAATAACAATAATAATAATAATAAT
Medicago truncatula EST, clone mtgmacc120021g01.
AJ500922.1:278-297
AGACAGTGATAGCATCCATGGACAGATGAT278CATTTCCCATAGCCTCCAAAATATCATAAGGAAGACAAACTTGAATATCA
EST432479 KV1 Medicago truncatula cDNA clone pKV1-14A22, mRNA sequence.
BF003981.1:470-489
AGACAGTGATAGCATCCATGGACAGATGAT470CATTTCCCATAGCCTCCAAAATATCATAAGGAAGACAAACTTGAATATCA
Mdfbg8014G16_e4518.g1 Apple_EST_Mdfbg Malus hybrid rootstock cDNA 5' similar to ref|NP_201516.1| hydroxycinnamoyl/benzoyltransferase-related [Arabidopsis thaliana] dbj|BAB10949.1| anthranilate N-hydro
GO547466.1:198-217
AGACTGTGACGGCATCCATGAATTCTGAAT198CATTTCCCATAGCCTCCAAAGTCTCAGCCAAAAGACAAGCTTCAATATCA
Mdfwf2084J03_e20516.g1 Apple_EST_Mdfwf Malus domestica cDNA 5', mRNA sequence.
GO547743.1:258-277
AGACTGTGACCGCATCCATGAATTCTGAAT258CATTTCCCATAGCCTCCAAAGTCTCAGCCAAAAGACAAACTTCAATATCA
Pyrus pyrifolia mRNA, clone: NLE2_34_52, 5' end sequence, expressed in leaf.
HX769505.1:129-148
AGACTGTGACCGCATCCATGAATTCTGAAT129CATTTCCCATAGCCTCCAAAGTCTCAGCCAAAAGACAAGCTTCAATATCA
TSA: Pyrus pyrifolia mRNA, contig: contig_11unknown.
FX408207.1:134-153
AGACTGTGACCGCATCCATGAATTCTGAAT134CATTTCCCATAGCCTCCAAAGTCTCAGCCAAAAGACAAGCTTCAATATCA
TSA: Pyrus x bretschneideri Unigene56070_XinShao mRNA sequence.
JR645321.1:113-132
AGACTGTGACCGCATCCATGAATTCTGAAT113CATTTCCCATAGCCTCCAAAGTCTCAGCCAAAAGACAAGCTTCAATATCA
Euphorbia peplus chromosome 5.
CP110841.1:6471181-6471200
ATGGTCTAAGAGCATCCATAAACTCTGAAT6471181CATTTCCCATAGCCTCCAAAACCTGAGGTGAAACACAAACTTCAATATCC
Trifolium repens isolate ACLI19 chromosome 03_Occ.
CP125840.1:3979789-3979808
ATGGCAATTAACCATGCATGAACTCATTGT3979789CATTTCCCATAGCCTCCAAAATCTGGTAAGGAAGACAAGGTACAATGTCA
Trifolium repens isolate ACLI19 chromosome 03_Occ.
CP125840.1:4008179-4008198
ATGGCAATTAACCATGCATGAACTCATTGT4008179CATTTCCCATAGCCTCCAAAATCTGGTAAGGAAGACAAGGTACAATGTCA
Trifolium repens isolate ACLI19 chromosome 03_Occ.
CP125840.1:4016839-4016858
ATGGCAATTAACCATGCATGAACTCATTGT4016839CATTTCCCATAGCCTCCAAAATCTGGTAAGGAAGACAAGGTACAATGTCA
Malus hybrid cultivar cultivar Royalty chromosome 2.
CP141954.1:14038196-14038215
AGACTGTGACCGCATCCATGAATTCTGAAT14038196CATTTCCCATAGCCTCCAAAGTCTCAGCCAAAAGACAAGCTTCAATATCA
Malus hybrid cultivar cultivar Royalty chromosome 2.
CP141971.1:14746561-14746580
AGACTGTGACCGCATCCATGAATTCTGAAT14746561CATTTCCCATAGCCTCCAAAGTCTCAGCCAAAAGACAAGCTTCAATATCA
Malus hybrid cultivar cultivar SH6 chromosome 2.
CP143359.1:14788996-14789015
AGACTGTGACCGCATCCATGAATTCTGAAT14788996CATTTCCCATAGCCTCCAAAGTCTCAGCCAAAAGACAAACTTCAATATCA
Malus hybrid cultivar cultivar SH6 chromosome 8.
CP143365.1:12373993-12374012
AGACTGTGACCGCATCCATGAATTCTGAAT12373993CATTTCCCATAGCCTCCAAAGTCTCAGCCAAAAGACAAGCTTCAATATCA
Malus hybrid cultivar cultivar SH6 chromosome 2.
CP143376.1:14311975-14311994
AGACTGTGACCGCATCCATGAATTCTGAAT14311975CATTTCCCATAGCCTCCAAAGTCTCAGCCAAAAGACAAGCTTCAATATCA
Malus hybrid cultivar cultivar SH6 chromosome 8.
CP143382.1:12038952-12038971
AGACTGTGACCGCATCCATGAATTCTGAAT12038952CATTTCCCATAGCCTCCAAAGTCTCAGCCAAAAGACAAGCTTCAATATCA
Malus sylvestris genome assembly, chromosome: 2.
OU696504.1:14453937-14453956
AGACTGTGACGGCATCCATGAATTCTGAAT14453937CATTTCCCATAGCCTCCAAAGTCTCAGCCAAAAGACAAGCTTCAATATCA
Malus sylvestris genome assembly, chromosome: 8.
OU696510.1:12381331-12381350
AGACTGTGACCGCATCCATGAATTCTGAAT12381331CATTTCCCATAGCCTCCAAAGTCTCAGCCAAAAGACAAGCTTCAATATCA
Malus domestica genome assembly, chromosome: 2.
OU696678.1:14773359-14773378
AGACTGTGACCGCATCCATGAATTCTGAAT14773359CATTTCCCATAGCCTCCAAAGTCTCAGCCAAAAGACAAACTTCAATATCA
Malus domestica genome assembly, chromosome: 2.
OU744543.1:14725150-14725169
AGACTGTGACCGCATCCATGAATTCTGAAT14725150CATTTCCCATAGCCTCCAAAGTCTCAGCCAAAAGACAAGCTTCAATATCA
Malus domestica genome assembly, chromosome: 8.
OU744549.1:12377901-12377920
AGACTGTGACCGCATCCATGAATTCTGAAT12377901CATTTCCCATAGCCTCCAAAGTCTCAGCCAAAAGACAAGCTTCAATATCA
Malus domestica genome assembly, chromosome: 2.
OU744954.1:14326086-14326105
AGACTGTGACCGCATCCATGAATTCTGAAT14326086CATTTCCCATAGCCTCCAAAGTCTCAGCCAAAAGACAAACTTCAATATCA
Malus domestica genome assembly, chromosome: 8.
OU744960.1:12326916-12326935
AGACTGTGACCGCATCCATGAATTCTGAAT12326916CATTTCCCATAGCCTCCAAAGTCTCAGCCAAAAGACAAGCTTCAATATCA
Malus domestica genome assembly, chromosome: 8.
OU744998.1:12468352-12468371
AGACTGTGACCGCATCCATGAATTCTGAAT12468352CATTTCCCATAGCCTCCAAAGTCTCAGCCAAAAGACAAGCTTCAATATCA
Medicago arabica genome assembly, chromosome: 5.
OX326968.1:44242560-44242579
CTAACTAAAAGATGTGTATGAATTGAGGGT44242560CATTTCCCATAGCCTCCAAAATATCATAAGAAAGACAAACTTCAACATCA
Astragalus glycyphyllos genome assembly, chromosome: 2.
OY754308.1:49328329-49328348
CAAATGAGTGATTGTCCAAAAACTCCGCAT49328329CATTTCCCATAGCCTCCAAAATCTCATACGGAAGGAAGACTTCAATATCT
Pyrus communis genome assembly, chromosome: 10.
OY757077.1:11125186-11125205
AGACTGTGACCGCATCCATGAATTCTGAAT11125186CATTTCCCATAGCCTCCAAAGTCTCAGCCAAAAGACAAGCTTCAATATCA
Viola odorata genome assembly, chromosome: 6.
OY829542.1:1696763-1696782
ACAAAGTGACAGCATCCATGAACTCCAAAT1696763CATTTCCCATAGCCTCCAAAACCTGGGGAGAAAAGCCAACTTCAACGTCT
Viola odorata genome assembly, chromosome: 6.
OY829542.1:1720331-1720350
ACAAAGTTACAGCATCCATGAACTCCAAAT1720331CATTTCCCATAGCCTCCAAAACCTGGGGAGAAATGCCAACTTCAACGTCT
Viola odorata genome assembly, chromosome: 6.
OY829542.1:1733803-1733822
ACAAAGTGACAGCATCCATGAACTCCAAAT1733803CATTTCCCATAGCCTCCAAAACCTGGGGAGAAATGCTAACTTCAACGTCA
Lacticaseibacillus casei strain FBL6 chromosome, complete genome.
CP074377.1:1713959-1713978
GCCTTTGTCGTTAACAATTCCTGCTTTGCG1713959CATTTCCCATAGCCTCCAAACTTTTCTGAAGTTTTTTAGTACAAAGTTAA
Lacticaseibacillus casei strain N chromosome.
CP077759.1:1538964-1538983
GCCTTTGTCGTTAACAATTCCTGCTTTGCG1538964CATTTCCCATAGCCTCCAAACTTTTCTGAAGTTTTTTAGTACAAAGTTAA
Sphenella marginata genome assembly, chromosome: 2.
OX608079.1:98891480-98891499
GACTGGAGTTGCTGTTTTTCAAAGTAACCG98891480CATTTCCCATAGCCTCCAAAAAAACATCAGCGCATGTCACACACTCGCGC
Canis lupus genome assembly, chromosome: 14.
HG994400.1:15229963-15229982
ATTATTATTATTATTATTGTTATTATTATT15229963TTTGGAGGCTATGGGAAATGACTTCCCATCTTACCGTTTGCATTTAGGTG
Medicago truncatula EST, clone mt--abc955108g07.
AJ497395.1:181-200
TGATATTCAAGTTTGTCTTCCTTATGATAT181TTTGGAGGCTATGGGAAATGATCATCTGTCCATGGATCCTATCACTGTCT
Mdfw2005i01.y1 Mdfw Malus domestica cDNA clone Mdfw2005i01 5' similar to TR:Q9SNE0 Q9SNE0 ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN, mRNA sequence.
CN491502.1:223-242
TGATATTGAAGTTTGTCTTTTGGCTGAGAC223TTTGGAGGCTATGGGAAATGATTCAGAATTCATGGATGCGGTCACAGTCT
Mdfr3003a11.y1 Mdfr Malus domestica cDNA clone Mdfr3003a11 5' similar to TR:Q9SNE0 Q9SNE0 ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN, mRNA sequence.
CN995719.2:174-193
TGATATTGAAGCTTGTCTTTTGGCTGAGAC174TTTGGAGGCTATGGGAAATGATTCAGAATTCATGGATGCGGTCACAGTCT
Mdfrt3047f11.y1 Mdfrt Malus domestica cDNA clone Mdfrt3047f11 5' similar to TR:O04201 O04201 HYPOTHETICAL 52.9 KD PROTEIN T29M21.14 IN CHROMOSOME II, mRNA sequence.
CO756486.1:217-236
TGATATTGAAGTTTGTCTTTTGGCTGAGAC217TTTGGAGGCTATGGGAAATGATTCAGAATTCATGGATGCGGTCACAGTCT
Mdfrt3104l21.y1 Mdfrt Malus domestica cDNA clone Mdfrt3104l21 5' similar to TR:Q9SNE0 Q9SNE0 ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN, mRNA sequence.
CV631283.1:497-516
TGATATTGAAGTTTGTCTTTTGGCTGAGAC497TTTGGAGGCTATGGGAAATGATTCAGAATTCATGGATGCGGTCACAGTCT
CV03080B2F05.f1 CV03-normalized library Euphorbia esula cDNA clone CV03080B2F05.f1 5, mRNA sequence.
DV149768.1:374-393
GGATATGGAAGTATGTGTTTCACCTGAGGT374TTTGGAGGCTATGGGAAATGATTCTGAGTTTATGGAGGCTATTGTCTGAT
Mdfrb3145P18.g1 Apple_EST_Mdfrb Malus domestica cDNA 5' similar to ref|NP_201516.1| hydroxycinnamoyl/benzoyltransferase-related [Arabidopsis thaliana] dbj|BAB10949.1| anthranilate N-hydroxycinnamoyl/b
GO521458.1:279-298
TGATATTGAAGCTTGTCTTTTGGCTGAGAC279TTTGGAGGCTATGGGAAATGATTCAGAATTCATGGATGCCGTCACAGTCT
tigr-gss-dog-17000311657600 Dog Library Canis lupus familiaris genomic, genomic survey sequence.
CE515911.1:415-434
ATTATTATTATTATTATTGTTATTATTATT415TTTGGAGGCTATGGGAAATGACTTCCCATCTTTACCGTTTGCATTTAGGG
Medicago truncatula clone mth2-25g21, WORKING DRAFT SEQUENCE, 4 ordered pieces.
AC235663.5:17437-17456
TGATATTCAAGTTTGTCTTCCTTATGATAT17437TTTGGAGGCTATGGGAAATGATCATCTGTCCATGGATGCTATCACTGTCT
Euphorbia peplus chromosome 1.
CP110837.1:5329522-5329541
TGATATCGAGGTATGTGTTTCGCCTGAGGT5329522TTTGGAGGCTATGGGAAATGATTCTGAATTCATGGATGCTGTTACTGTTG
Malus hybrid cultivar cultivar Flame chromosome 2.
CP141911.1:21335128-21335147
TGATATTGAAGCTTGTCTTTTGGCTGAGAC21335128TTTGGAGGCTATGGGAAATGATTCAGAATTCATGGATGCGGTCACAGTCT
Malus hybrid cultivar cultivar Flame chromosome 8.
CP141917.1:17185047-17185066
TGATATTGAAGCTTGTCTTTTGGCTGAGAC17185047TTTGGAGGCTATGGGAAATGATTCAGAATTCATGGATGCGGTCACAGTCT
Malus hybrid cultivar cultivar Flame chromosome 2.
CP141928.1:23488786-23488805
TGATATTGAAGCTTGTCTTTTGGCTGAGAC23488786TTTGGAGGCTATGGGAAATGATTCAGAATTCATGGATGCGGTCACAGTCT
Malus hybrid cultivar cultivar Flame chromosome 8.
CP141934.1:18327508-18327527
TGATATTGAAGCTTGTCTTTTGGCTGAGAC18327508TTTGGAGGCTATGGGAAATGATTCAGAATTCATGGATGCGGTCACAGTCT
Malus hybrid cultivar cultivar Royalty chromosome 8.
CP141960.1:17958266-17958285
TGATATTGAAGCTTGTCTTTTGGCTGAGAC17958266TTTGGAGGCTATGGGAAATGATTCAGAATTCATGCATGCGATCACAGTCT
Malus hybrid cultivar cultivar Royalty chromosome 8.
CP141977.1:17913081-17913100
TGATATTGAAGCTTGTCTTTTGGCTGAGAC17913081TTTGGAGGCTATGGGAAATGATTCAGAATTCATGGATGCGGTCACAGTCT
Trifolium subterraneum genome assembly, chromosome: 4.
OX637464.1:35918735-35918754
TGATATTGAAGTTTGTCTTTCTTATGATAT35918735TTTGGAGGCTATGGGAAATGATCTTGAATTCATAGATATATGTTCTAATT
Trifolium fragiferum genome assembly, chromosome: 4.
OX940792.1:46153068-46153087
TGATATTGAAGTTTGTCTTTCTTATGATGT46153068TTTGGAGGCTATGGGAAATGATCTTGAATTCATACATGTATGTTCTAATT
Medicago lupulina genome assembly, chromosome: 5.
OY283143.1:17453219-17453238
TGATGTTGAAGTTTGTCTTTCTTATGATAT17453219TTTGGAGGCTATGGGAAATGACCCTCAATTTATATATATCTTTTAATCAG
Medicago lupulina genome assembly, chromosome: 5.
OY283143.1:17526582-17526601
TGATATTGAAGTTTGTCTTCCTTATGATAT17526582TTTGGAGGCTATGGGAAATGACCAATTGCTCGTGGATGCTATGTCTATCT
Malus x robusta genome assembly, chromosome: 7.
OY720331.1:22205956-22205975
TGATATTGAAGCTTGTCTTTTGGCTGAGAC22205956TTTGGAGGCTATGGGAAATGATTCAGAATTCATGGATGCGGTCACAGTCT
Euphorbia lathyris genome assembly, chromosome: 5.
OY755224.1:74170611-74170630
TGATATTCATGTTTGTGTTTCGCCTCAGGT74170611TTTGGAGGCTATGGGAAATGATCCTGAGTTTATGGATGTTGTTACTGTCT
Euphorbia lathyris genome assembly, chromosome: 5.
OY755224.1:74176802-74176821
TGATATTGAAGTTTGTGTTTCTACTCAGGA74176802TTTGGAGGCTATGGGAAATGATTCTGAGTTTATGGATGCTGTTACTGTCT
Euphorbia lathyris genome assembly, chromosome: 5.
OY755224.1:74193385-74193404
TGATATTGAAGTTTGTGTTTCTCCTCTGGT74193385TTTGGAGGCTATGGGAAATGATTCTGAGTTTATGGATGTTTTTAGTGTGT
Crataegus laevigata genome assembly, chromosome: 5.
OY756942.1:26263196-26263215
GTGGTGCTGGGAATAAGTCACATGGGAAAA26263196TTTGGAGGCTATGGGAAATGATTCAGAATTCATGGATGCGATCACAGTCT
Viola odorata genome assembly, chromosome: 7.
OY829543.1:61398245-61398264
AGATGTTGAAGTTTGTGTTTGTCCACATGT61398245TTTGGAGGCTATGGGAAATGATTTGGAGTTCATGGATGCTGTCATTTTGT
Lacticaseibacillus casei strain LC5 chromosome, complete genome.
CP017065.1:236472-236491
TTAACTTTGTACTAAAAAACTTCAGAAAAG236472TTTGGAGGCTATGGGAAATGCGCAAAGCAGGAATTGTTAACGACAAAGGC
Lacticaseibacillus zeae strain FBL8 chromosome, complete genome.
CP074379.1:238994-239013
TTAACTTTGTACTAAAAAACTTCAGAAAAG238994TTTGGAGGCTATGGGAAATGCGCAAAGCAGGAATTGTTAACGACAAAGGC
Lacticaseibacillus huelsenbergensis strain DSM 115425 chromosome, complete genome.
CP120687.1:1449838-1449857
TTAACTTTGTACTAAAAAACTTCAGAAAAG1449838TTTGGAGGCTATGGGAAATGCGCAAAGCAGGAATTGTTAACGACAAAGGC
Lacticaseibacillus huelsenbergensis strain DSM 115424 chromosome, complete genome.
CP120688.1:248131-248150
TTAACTTTGTACTAAAAAACTTCAGAAAAG248131TTTGGAGGCTATGGGAAATGCGCAAAGCAGGAATTGTTAACGACAAAGGC
Lacticaseibacillus sp. NCIMB 15473 chromosome, complete genome.
CP132483.1:236472-236491
TTAACTTTGTACTAAAAAACTTCAGAAAAG236472TTTGGAGGCTATGGGAAATGCGCAAAGCAGGAATTGTTAACGACAAAGGC
Lacticaseibacillus sp. NCIMB 15474 chromosome, complete genome.
CP132484.1:329679-329698
TTAACTTTGTACTAAAAAACTTCAGAAAAG329679TTTGGAGGCTATGGGAAATGCGCAAAGCAGGAATTGTTAACGACAAAGGC
Lacticaseibacillus sp. NCIMB 15475 chromosome, complete genome.
CP132485.1:329555-329574
TTAACTTTGTACTAAAAAACTTCAGAAAAG329555TTTGGAGGCTATGGGAAATGCGCAAAGCAGGAATTGTTAACGACAAAGGC
Lacticaseibacillus casei strain LMG 24102 chromosome, complete genome.
CP136127.1:236472-236491
TTAACTTTGTACTAAAAAACTTCAGAAAAG236472TTTGGAGGCTATGGGAAATGCGCAAAGCAGGAATTGTTAACGACAAAGGC
Lacticaseibacillus casei strain LMG 24099 chromosome, complete genome.
CP136128.1:236471-236490
TTAACTTTGTACTAAAAAACTTCAGAAAAG236471TTTGGAGGCTATGGGAAATGCGCAAAGCAGGAATTGTTAACGACAAAGGC
Lactobacillus zeae isolate CECT 9104 genome assembly, chromosome: 1.
LS991421.1:254992-255011
TTAACTTTGTACTAAAAAACTTCAGAAAAG254992TTTGGAGGCTATGGGAAATGCGCAAAGCAGGAATTGTTAACGACAAAGGC
Amaurobius ferox genome assembly, chromosome: X3.
OX578142.1:118759936-118759955
CCCATAGAATCTTTCAAGATTGGCTAAATA118759936TTTGGAGGCTATGGGAAATGAGTTTGATATGCTTCAAAGTAGTAATTGAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CATTTCCCATAGCCTCCAAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CATTTCCCATAGCCTCCAAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.523 | 0.515 | search_plus_done; http://172.18.8.135:50400/match?q=CATTTCCCATAGCCTCCAAA&k=0&no_gap=0&offset=0&limit=50
0.912 | 0.389 | search_minus_done; http://172.18.8.135:50400/match?q=TTTGGAGGCTATGGGAAATG&k=0&no_gap=0&offset=0&limit=14
0.936 | 0.024 | cgi_end;

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