GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-03-03 04:29:18, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Canis lupus familiaris breed Labrador retriever chromosome 14a.
CP050589.1:47692135-47692154
CACCTAAATGCAAACGGTAAGATGGGAAGT47692135CATTTCCCATAGCCTCCAAAAATAATAATAACAATAATAATAATAATAAT
Canis lupus familiaris breed Labrador retriever chromosome 14b.
CP050623.1:47686729-47686748
CACCTAAATGCAAACGGTAAGATGGGAAGT47686729CATTTCCCATAGCCTCCAAAAATAATAATAACAATAATAATAATAATAAT
Vulpes vulpes genome assembly, chromosome: 10.
OZ067171.1:111866841-111866860
CACCTAAATGCAAACGGTAAGATGGGAAGT111866841CATTTCCCATAGCCTCCAAAAATAATAATAACAATAATAATAATAATAAT
Vulpes vulpes genome assembly, chromosome: 10.
OZ067322.1:111836049-111836068
CACCTAAATGCAAACGGTAAGATGGGAAGT111836049CATTTCCCATAGCCTCCAAAAATAATAATAACAATAATAATAATAATAAT
Medicago truncatula EST, clone mtgmacc120021g01.
AJ500922.1:278-297
AGACAGTGATAGCATCCATGGACAGATGAT278CATTTCCCATAGCCTCCAAAATATCATAAGGAAGACAAACTTGAATATCA
EST432479 KV1 Medicago truncatula cDNA clone pKV1-14A22, mRNA sequence.
BF003981.1:470-489
AGACAGTGATAGCATCCATGGACAGATGAT470CATTTCCCATAGCCTCCAAAATATCATAAGGAAGACAAACTTGAATATCA
Mdfbg8014G16_e4518.g1 Apple_EST_Mdfbg Malus hybrid rootstock cDNA 5' similar to ref|NP_201516.1| hydroxycinnamoyl/benzoyltransferase-related [Arabidopsis thaliana] dbj|BAB10949.1| anthranilate N-hydro
GO547466.1:198-217
AGACTGTGACGGCATCCATGAATTCTGAAT198CATTTCCCATAGCCTCCAAAGTCTCAGCCAAAAGACAAGCTTCAATATCA
Mdfwf2084J03_e20516.g1 Apple_EST_Mdfwf Malus domestica cDNA 5', mRNA sequence.
GO547743.1:258-277
AGACTGTGACCGCATCCATGAATTCTGAAT258CATTTCCCATAGCCTCCAAAGTCTCAGCCAAAAGACAAACTTCAATATCA
Pyrus pyrifolia mRNA, clone: NLE2_34_52, 5' end sequence, expressed in leaf.
HX769505.1:129-148
AGACTGTGACCGCATCCATGAATTCTGAAT129CATTTCCCATAGCCTCCAAAGTCTCAGCCAAAAGACAAGCTTCAATATCA
TSA: Pyrus pyrifolia mRNA, contig: contig_11unknown.
FX408207.1:134-153
AGACTGTGACCGCATCCATGAATTCTGAAT134CATTTCCCATAGCCTCCAAAGTCTCAGCCAAAAGACAAGCTTCAATATCA
TSA: Pyrus x bretschneideri Unigene56070_XinShao mRNA sequence.
JR645321.1:113-132
AGACTGTGACCGCATCCATGAATTCTGAAT113CATTTCCCATAGCCTCCAAAGTCTCAGCCAAAAGACAAGCTTCAATATCA
Euphorbia peplus chromosome 5.
CP110841.1:6471181-6471200
ATGGTCTAAGAGCATCCATAAACTCTGAAT6471181CATTTCCCATAGCCTCCAAAACCTGAGGTGAAACACAAACTTCAATATCC
Trifolium repens isolate ACLI19 chromosome 03_Occ.
CP125840.1:3979789-3979808
ATGGCAATTAACCATGCATGAACTCATTGT3979789CATTTCCCATAGCCTCCAAAATCTGGTAAGGAAGACAAGGTACAATGTCA
Trifolium repens isolate ACLI19 chromosome 03_Occ.
CP125840.1:4008179-4008198
ATGGCAATTAACCATGCATGAACTCATTGT4008179CATTTCCCATAGCCTCCAAAATCTGGTAAGGAAGACAAGGTACAATGTCA
Trifolium repens isolate ACLI19 chromosome 03_Occ.
CP125840.1:4016839-4016858
ATGGCAATTAACCATGCATGAACTCATTGT4016839CATTTCCCATAGCCTCCAAAATCTGGTAAGGAAGACAAGGTACAATGTCA
Malus hybrid cultivar cultivar Royalty chromosome 2.
CP141954.1:14038196-14038215
AGACTGTGACCGCATCCATGAATTCTGAAT14038196CATTTCCCATAGCCTCCAAAGTCTCAGCCAAAAGACAAGCTTCAATATCA
Malus hybrid cultivar cultivar Royalty chromosome 2.
CP141971.1:14746561-14746580
AGACTGTGACCGCATCCATGAATTCTGAAT14746561CATTTCCCATAGCCTCCAAAGTCTCAGCCAAAAGACAAGCTTCAATATCA
Malus hybrid cultivar cultivar SH6 chromosome 2.
CP143359.1:14788996-14789015
AGACTGTGACCGCATCCATGAATTCTGAAT14788996CATTTCCCATAGCCTCCAAAGTCTCAGCCAAAAGACAAACTTCAATATCA
Malus hybrid cultivar cultivar SH6 chromosome 8.
CP143365.1:12373993-12374012
AGACTGTGACCGCATCCATGAATTCTGAAT12373993CATTTCCCATAGCCTCCAAAGTCTCAGCCAAAAGACAAGCTTCAATATCA
Malus hybrid cultivar cultivar SH6 chromosome 2.
CP143376.1:14311975-14311994
AGACTGTGACCGCATCCATGAATTCTGAAT14311975CATTTCCCATAGCCTCCAAAGTCTCAGCCAAAAGACAAGCTTCAATATCA
Malus hybrid cultivar cultivar SH6 chromosome 8.
CP143382.1:12038952-12038971
AGACTGTGACCGCATCCATGAATTCTGAAT12038952CATTTCCCATAGCCTCCAAAGTCTCAGCCAAAAGACAAGCTTCAATATCA
Malus domestica cultivar WA 38 chromosome 8B.
CP165691.1:12388739-12388758
AGACTGTGACCGCATCCATGAATTCTGAAT12388739CATTTCCCATAGCCTCCAAAGTCTCAGCCAAAAGACAAGCTTCAATATCA
Malus domestica cultivar WA 38 chromosome 2A.
CP165702.1:14808098-14808117
AGACTGTGACCGCATCCATGAATTCTGAAT14808098CATTTCCCATAGCCTCCAAAGTCTCAGCCAAAAGACAAACTTCAATATCA
Malus domestica cultivar WA 38 chromosome 8A.
CP165708.1:12154098-12154117
AGACTGTGACCGCATCCATGAATTCTGAAT12154098CATTTCCCATAGCCTCCAAAGTCTCAGCCAAAAGACAAGCTTCAATATCA
Malus domestica cultivar Golden Delicious chromosome 08.
CP168772.1:12802739-12802758
AGACTGTGACCGCATCCATGAATTCTGAAT12802739CATTTCCCATAGCCTCCAAAGTCTCAGCCAAAAGACAAGCTTCAATATCA
Malus domestica cultivar Golden Delicious chromosome 02.
CP168783.1:14968635-14968654
AGACTGTGACCGCATCCATGAATTCTGAAT14968635CATTTCCCATAGCCTCCAAAGTCTCAGCCAAAAGACAAACTTCAATATCA
Malus domestica cultivar Golden Delicious chromosome 08.
CP168789.1:12400238-12400257
AGACTGTGACCGCATCCATGAATTCTGAAT12400238CATTTCCCATAGCCTCCAAAGTCTCAGCCAAAAGACAAGCTTCAATATCA
Malus sylvestris genome assembly, chromosome: 2.
OU696504.1:14453937-14453956
AGACTGTGACGGCATCCATGAATTCTGAAT14453937CATTTCCCATAGCCTCCAAAGTCTCAGCCAAAAGACAAGCTTCAATATCA
Malus sylvestris genome assembly, chromosome: 8.
OU696510.1:12381331-12381350
AGACTGTGACCGCATCCATGAATTCTGAAT12381331CATTTCCCATAGCCTCCAAAGTCTCAGCCAAAAGACAAGCTTCAATATCA
Malus domestica genome assembly, chromosome: 2.
OU696678.1:14773359-14773378
AGACTGTGACCGCATCCATGAATTCTGAAT14773359CATTTCCCATAGCCTCCAAAGTCTCAGCCAAAAGACAAACTTCAATATCA
Malus domestica genome assembly, chromosome: 2.
OU744543.1:14725150-14725169
AGACTGTGACCGCATCCATGAATTCTGAAT14725150CATTTCCCATAGCCTCCAAAGTCTCAGCCAAAAGACAAGCTTCAATATCA
Malus domestica genome assembly, chromosome: 8.
OU744549.1:12377901-12377920
AGACTGTGACCGCATCCATGAATTCTGAAT12377901CATTTCCCATAGCCTCCAAAGTCTCAGCCAAAAGACAAGCTTCAATATCA
Malus domestica genome assembly, chromosome: 2.
OU744954.1:14326086-14326105
AGACTGTGACCGCATCCATGAATTCTGAAT14326086CATTTCCCATAGCCTCCAAAGTCTCAGCCAAAAGACAAACTTCAATATCA
Malus domestica genome assembly, chromosome: 8.
OU744960.1:12326916-12326935
AGACTGTGACCGCATCCATGAATTCTGAAT12326916CATTTCCCATAGCCTCCAAAGTCTCAGCCAAAAGACAAGCTTCAATATCA
Malus domestica genome assembly, chromosome: 8.
OU744998.1:12468352-12468371
AGACTGTGACCGCATCCATGAATTCTGAAT12468352CATTTCCCATAGCCTCCAAAGTCTCAGCCAAAAGACAAGCTTCAATATCA
Medicago arabica genome assembly, chromosome: 5.
OX326968.1:44242560-44242579
CTAACTAAAAGATGTGTATGAATTGAGGGT44242560CATTTCCCATAGCCTCCAAAATATCATAAGAAAGACAAACTTCAACATCA
Astragalus glycyphyllos genome assembly, chromosome: 2.
OY754308.1:49328329-49328348
CAAATGAGTGATTGTCCAAAAACTCCGCAT49328329CATTTCCCATAGCCTCCAAAATCTCATACGGAAGGAAGACTTCAATATCT
Pyrus communis genome assembly, chromosome: 10.
OY757077.1:11125186-11125205
AGACTGTGACCGCATCCATGAATTCTGAAT11125186CATTTCCCATAGCCTCCAAAGTCTCAGCCAAAAGACAAGCTTCAATATCA
Viola odorata genome assembly, chromosome: 6.
OY829542.1:1696763-1696782
ACAAAGTGACAGCATCCATGAACTCCAAAT1696763CATTTCCCATAGCCTCCAAAACCTGGGGAGAAAAGCCAACTTCAACGTCT
Viola odorata genome assembly, chromosome: 6.
OY829542.1:1720331-1720350
ACAAAGTTACAGCATCCATGAACTCCAAAT1720331CATTTCCCATAGCCTCCAAAACCTGGGGAGAAATGCCAACTTCAACGTCT
Viola odorata genome assembly, chromosome: 6.
OY829542.1:1733803-1733822
ACAAAGTGACAGCATCCATGAACTCCAAAT1733803CATTTCCCATAGCCTCCAAAACCTGGGGAGAAATGCTAACTTCAACGTCA
Trifolium occidentale genome assembly, chromosome: 3.
OZ060770.1:3961589-3961608
ATGGCAATTAACCATGCATGAACTCATTGT3961589CATTTCCCATAGCCTCCAAAATCTGGTAAGGAAGACAAGGTACAATGTCA
Euphorbia peplus genome assembly, chromosome: 3.
OZ123148.1:5721529-5721548
ATGGTCTAAGAGCATCCATAAACTCTAAAT5721529CATTTCCCATAGCCTCCAAAACCTGAGGTGAAACACAAACTTCAATATCC
Lacticaseibacillus casei strain FBL6 chromosome, complete genome.
CP074377.1:1713959-1713978
GCCTTTGTCGTTAACAATTCCTGCTTTGCG1713959CATTTCCCATAGCCTCCAAACTTTTCTGAAGTTTTTTAGTACAAAGTTAA
Lacticaseibacillus casei strain N chromosome.
CP077759.1:1538964-1538983
GCCTTTGTCGTTAACAATTCCTGCTTTGCG1538964CATTTCCCATAGCCTCCAAACTTTTCTGAAGTTTTTTAGTACAAAGTTAA
Sphenella marginata genome assembly, chromosome: 2.
OX608079.1:98891480-98891499
GACTGGAGTTGCTGTTTTTCAAAGTAACCG98891480CATTTCCCATAGCCTCCAAAAAAACATCAGCGCATGTCACACACTCGCGC
Eumandya parva genome assembly, chromosome: 10.
OZ060472.1:58071262-58071281
CCTCACAATGATAAGTAATGGGCAACTCCA58071262CATTTCCCATAGCCTCCAAATGGGGTCCCCTCACCACTGGATGTCTTTTA
Canis lupus genome assembly, chromosome: 14.
HG994400.1:15229963-15229982
ATTATTATTATTATTATTGTTATTATTATT15229963TTTGGAGGCTATGGGAAATGACTTCCCATCTTACCGTTTGCATTTAGGTG
Medicago truncatula EST, clone mt--abc955108g07.
AJ497395.1:181-200
TGATATTCAAGTTTGTCTTCCTTATGATAT181TTTGGAGGCTATGGGAAATGATCATCTGTCCATGGATCCTATCACTGTCT
Mdfw2005i01.y1 Mdfw Malus domestica cDNA clone Mdfw2005i01 5' similar to TR:Q9SNE0 Q9SNE0 ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN, mRNA sequence.
CN491502.1:223-242
TGATATTGAAGTTTGTCTTTTGGCTGAGAC223TTTGGAGGCTATGGGAAATGATTCAGAATTCATGGATGCGGTCACAGTCT
Mdfr3003a11.y1 Mdfr Malus domestica cDNA clone Mdfr3003a11 5' similar to TR:Q9SNE0 Q9SNE0 ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN, mRNA sequence.
CN995719.2:174-193
TGATATTGAAGCTTGTCTTTTGGCTGAGAC174TTTGGAGGCTATGGGAAATGATTCAGAATTCATGGATGCGGTCACAGTCT
tigr-gss-dog-17000311657600 Dog Library Canis lupus familiaris genomic, genomic survey sequence.
CE515911.1:415-434
ATTATTATTATTATTATTGTTATTATTATT415TTTGGAGGCTATGGGAAATGACTTCCCATCTTTACCGTTTGCATTTAGGG
Medicago truncatula clone mth2-25g21, WORKING DRAFT SEQUENCE, 4 ordered pieces.
AC235663.5:17437-17456
TGATATTCAAGTTTGTCTTCCTTATGATAT17437TTTGGAGGCTATGGGAAATGATCATCTGTCCATGGATGCTATCACTGTCT
Euphorbia peplus chromosome 1.
CP110837.1:5329522-5329541
TGATATCGAGGTATGTGTTTCGCCTGAGGT5329522TTTGGAGGCTATGGGAAATGATTCTGAATTCATGGATGCTGTTACTGTTG
Malus hybrid cultivar cultivar Flame chromosome 2.
CP141911.1:21335128-21335147
TGATATTGAAGCTTGTCTTTTGGCTGAGAC21335128TTTGGAGGCTATGGGAAATGATTCAGAATTCATGGATGCGGTCACAGTCT
Malus hybrid cultivar cultivar Flame chromosome 8.
CP141917.1:17185047-17185066
TGATATTGAAGCTTGTCTTTTGGCTGAGAC17185047TTTGGAGGCTATGGGAAATGATTCAGAATTCATGGATGCGGTCACAGTCT
Trifolium subterraneum genome assembly, chromosome: 4.
OX637464.1:35918735-35918754
TGATATTGAAGTTTGTCTTTCTTATGATAT35918735TTTGGAGGCTATGGGAAATGATCTTGAATTCATAGATATATGTTCTAATT
Trifolium fragiferum genome assembly, chromosome: 4.
OX940792.1:46153068-46153087
TGATATTGAAGTTTGTCTTTCTTATGATGT46153068TTTGGAGGCTATGGGAAATGATCTTGAATTCATACATGTATGTTCTAATT
Medicago lupulina genome assembly, chromosome: 5.
OY283143.1:17453219-17453238
TGATGTTGAAGTTTGTCTTTCTTATGATAT17453219TTTGGAGGCTATGGGAAATGACCCTCAATTTATATATATCTTTTAATCAG
Medicago lupulina genome assembly, chromosome: 5.
OY283143.1:17526582-17526601
TGATATTGAAGTTTGTCTTCCTTATGATAT17526582TTTGGAGGCTATGGGAAATGACCAATTGCTCGTGGATGCTATGTCTATCT
Euphorbia lathyris genome assembly, chromosome: 5.
OY755224.1:74170611-74170630
TGATATTCATGTTTGTGTTTCGCCTCAGGT74170611TTTGGAGGCTATGGGAAATGATCCTGAGTTTATGGATGTTGTTACTGTCT
Euphorbia lathyris genome assembly, chromosome: 5.
OY755224.1:74176802-74176821
TGATATTGAAGTTTGTGTTTCTACTCAGGA74176802TTTGGAGGCTATGGGAAATGATTCTGAGTTTATGGATGCTGTTACTGTCT
Euphorbia lathyris genome assembly, chromosome: 5.
OY755224.1:74193385-74193404
TGATATTGAAGTTTGTGTTTCTCCTCTGGT74193385TTTGGAGGCTATGGGAAATGATTCTGAGTTTATGGATGTTTTTAGTGTGT
Astragalus alpinus genome assembly, chromosome: 6.
OZ076763.1:7635996-7636015
TGACATTGAAGTTTGTCTTCCTTTTGAGAT7635996TTTGGAGGCTATGGGAAATGACCCTGAATTCTTAGGCAATCACTAATGTC
Astragalus alpinus genome assembly, chromosome: 6.
OZ076819.1:7411466-7411485
TGACATTGAAGTTTGTCTTCCTTTTGAGAT7411466TTTGGAGGCTATGGGAAATGACCCTGAATTCTTAGGCAATCACTAATGTC
Euphorbia peplus genome assembly, chromosome: 8.
OZ123153.1:5217941-5217960
TGATATCGAGGTATGTGTTTCGCCTGAGGT5217941TTTGGAGGCTATGGGAAATGATTCTGAATTCATGGATGCTGTTACTGTTG
Lacticaseibacillus casei strain LC5, complete genome.
CP017065.1:236472-236491
TTAACTTTGTACTAAAAAACTTCAGAAAAG236472TTTGGAGGCTATGGGAAATGCGCAAAGCAGGAATTGTTAACGACAAAGGC
Lacticaseibacillus zeae strain FBL8 chromosome, complete genome.
CP074379.1:238994-239013
TTAACTTTGTACTAAAAAACTTCAGAAAAG238994TTTGGAGGCTATGGGAAATGCGCAAAGCAGGAATTGTTAACGACAAAGGC
Lacticaseibacillus huelsenbergensis strain DSM 115425 chromosome, complete genome.
CP120687.1:1449838-1449857
TTAACTTTGTACTAAAAAACTTCAGAAAAG1449838TTTGGAGGCTATGGGAAATGCGCAAAGCAGGAATTGTTAACGACAAAGGC
Lacticaseibacillus huelsenbergensis strain DSM 115424 chromosome, complete genome.
CP120688.1:248131-248150
TTAACTTTGTACTAAAAAACTTCAGAAAAG248131TTTGGAGGCTATGGGAAATGCGCAAAGCAGGAATTGTTAACGACAAAGGC
Lacticaseibacillus styriensis strain NCIMB 15473 chromosome, complete genome.
CP132483.1:236472-236491
TTAACTTTGTACTAAAAAACTTCAGAAAAG236472TTTGGAGGCTATGGGAAATGCGCAAAGCAGGAATTGTTAACGACAAAGGC
Lacticaseibacillus styriensis strain MRD1975 chromosome, complete genome.
CP178534.1:234232-234251
TTAACTTTGTACTAAAAAACTTCAGAAAAG234232TTTGGAGGCTATGGGAAATGCGCAAAGCAGGAATTGTTAACGACAAAGGC
Lactobacillus zeae isolate CECT 9104 genome assembly, chromosome: 1.
LS991421.1:254992-255011
TTAACTTTGTACTAAAAAACTTCAGAAAAG254992TTTGGAGGCTATGGGAAATGCGCAAAGCAGGAATTGTTAACGACAAAGGC
Amaurobius ferox genome assembly, chromosome: X3.
OX578142.1:118759936-118759955
CCCATAGAATCTTTCAAGATTGGCTAAATA118759936TTTGGAGGCTATGGGAAATGAGTTTGATATGCTTCAAAGTAGTAATTGAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CATTTCCCATAGCCTCCAAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CATTTCCCATAGCCTCCAAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.503 | 0.494 | search_plus_done; http://172.18.8.135:50800/match?q=CATTTCCCATAGCCTCCAAA&k=0&no_gap=0&offset=0&limit=50
0.741 | 0.238 | search_minus_done; http://172.18.8.135:50800/match?q=TTTGGAGGCTATGGGAAATG&k=0&no_gap=0&offset=0&limit=3
0.760 | 0.019 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).