GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 21:57:47, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Microchirus variegatus genome assembly, chromosome: 21.
OY735194.1:11381816-11381835
TTTGTGGAACTTTACCAACGATATGATGAA11381816CATTTGCTCACTTACCCCATTTATCCATTGTTAGGAGAGAGTGTTGTGCC
Acomys kempi genome assembly, chromosome: 9.
OU015363.1:116780278-116780297
CATCACTGCAACAGGAACCCTAAATAAGAC116780278ATGGGGTAAGTGAGCAAATGGAGAGGGAGGGAGAGAGGGAGGGAGGGAAG
EST2381 Tender roots cDNA library of tea plant Camellia sinensis cDNA clone 07102311-CHAG_26_13.M13+_E02.ab1, mRNA sequence.
GE652054.1:466-485
ACACACACACACACACAAAAGCTTTAGACG466ATGGGGTAAGTGAGCAAATGGTTAAAGCACTACTGAATACTGATCAAAGC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CATTTGCTCACTTACCCCAT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CATTTGCTCACTTACCCCAT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.110 | 0.101 | search_plus_done; http://172.18.8.135:50400/match?q=CATTTGCTCACTTACCCCAT&k=0&no_gap=0&offset=0&limit=50
0.210 | 0.100 | search_minus_done; http://172.18.8.135:50400/match?q=ATGGGGTAAGTGAGCAAATG&k=0&no_gap=0&offset=0&limit=49
0.211 | 0.001 | cgi_end;

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