GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 20:40:00, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Arachis hypogaea cultivar Shitouqi chromosome B03.
CP030995.1:4743565-4743584
ACGTTGTTATAGTTTTGGTGCTTAAATAAT4743565CCAAAAACGATGTCGAATCATTTGTTTTAGGAGAAAAAATTTCAATAAAT
Arachis ipaensis cultivar K30076 chromosome 03.
CP049894.1:4693361-4693380
ACGTTGTTATAGTTTTGGTGCTTAAATAAT4693361CCAAAAACGATGTCGAATCATTTGTTTTAGGAGAAAAAATTTCAATAAAT
Phaedon cochleariae genome assembly, chromosome: 2.
OU896708.1:6958224-6958243
ATTTGCGATTTGAACAAAATCAGGAAAATG6958224CCAAAAACGATGTCGAATCATAATCAACGGATCAAATCAAGATCACGATC
Arachis hypogaea DNA, clone: 8iHA00A32, cultivar: YI-0311.
DE998453.1:297-316
ATTTATTGAAATTTTTTCTCCTAAAACAAA297TGATTCGACATCGTTTTTGGATTATTTAAGCACCAAAACTATAACAACGT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CCAAAAACGATGTCGAATCA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CCAAAAACGATGTCGAATCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.124 | 0.115 | search_plus_done; http://172.18.8.135:50400/match?q=CCAAAAACGATGTCGAATCA&k=0&no_gap=0&offset=0&limit=50
0.164 | 0.039 | search_minus_done; http://172.18.8.135:50400/match?q=TGATTCGACATCGTTTTTGG&k=0&no_gap=0&offset=0&limit=47
0.165 | 0.001 | cgi_end;

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