GGGenome | Results

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2025-04-09 22:26:58, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Chionographis japonica genome assembly, chromosome: 11.
OX393559.1:5104412-5104431

ACAACCGGGGCCCACCGGACCCGACCCAAG5104412CCAAAGAAGAGGCAGAGTGGGCCCATCCTCAAGTGGGGCCCACCTAGCCC

Plecotus auritus genome assembly, chromosome: 6.
OY734027.1:157376330-157376349

CCACCGGATCTCCTGGGACTGATGCTGTTT157376330CCACTCTGCCTCTTCTTTGGCTCATTACAGCCCCTGGGTAGGGTGAGGAC

Apoda limacodes genome assembly, chromosome: 8.
OX291548.1:20671696-20671715

TATCATAGTGACTCATTTTGAGACTACTAT20671696CCACTCTGCCTCTTCTTTGGAAAAAACTTTATATTTAATGTTTTTTAAAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.009 | 0.009 | search_start;
0.098 | 0.089 | search_plus_done; http://172.18.8.135:50400/match?q=CCAAAGAAGAGGCAGAGTGG&k=0&no_gap=0&offset=0&limit=50
0.120 | 0.022 | search_minus_done; http://172.18.8.135:50400/match?q=CCACTCTGCCTCTTCTTTGG&k=0&no_gap=0&offset=0&limit=49
0.122 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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